Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_P06
         (222 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   0.44 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   1.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   4.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   4.1  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              19   5.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    19   7.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    19   7.2  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    19   7.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    19   7.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   9.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   9.5  

>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 0.44
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 53  LILGSCIFLFIYSVTSC 3
           LILGSC  +++ S+  C
Sbjct: 178 LILGSCKCIYVQSINLC 194


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 1.0
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = +3

Query: 123 NVPTTSLAWNSYNYILIVRLYTLPLNAIHLITN 221
           NVP     WN   ++ I+R   +P +++++I+N
Sbjct: 65  NVPIDVDRWNGKTFVTILRNDGVP-SSLNVISN 96


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.8 bits (39), Expect = 4.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 111 ILLLNVPTTSLAWNSYNYI 167
           +LLLN+    + W  Y +I
Sbjct: 551 LLLLNLSENHIEWFDYAFI 569


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 19.8 bits (39), Expect = 4.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 131 YDFTRMEFI*LYSNSPSIYSTSKCNPSDYQ 220
           Y+F  + F  L +N   +   ++C  SD Q
Sbjct: 560 YNFNEVNFRILGANVNDLIMNTRCANSDNQ 589


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 19.4 bits (38), Expect = 5.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 154 EFHASEVVGTLSNKILCPIEKLWNLRFLHL 65
           ++H  E + T  +KI    E   + +FLH+
Sbjct: 99  QYHDDEDLKTFFHKIALTCEDDVHRKFLHV 128


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 71  PFKIKALILGSCIF 30
           PF +  L+LG  IF
Sbjct: 91  PFNVAYLLLGKWIF 104


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 71  PFKIKALILGSCIF 30
           PF +  L+LG  IF
Sbjct: 91  PFNVAYLLLGKWIF 104


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 19.0 bits (37), Expect = 7.2
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +3

Query: 54  CLYFKWRKRKFHSFSIGHKILLLNVPTTSLAWNSYNYIL 170
           C +   +K  FH  SI +  L L    T L  +    +L
Sbjct: 92  CFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVL 130


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 19.0 bits (37), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 71  PFKIKALILGSCIF 30
           PF +  L+LG  IF
Sbjct: 91  PFNVAYLLLGKWIF 104


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 86  EFTFPPFKIKALI 48
           EFT PP    ALI
Sbjct: 957 EFTGPPLPYAALI 969


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.6 bits (36), Expect = 9.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 86  EFTFPPFKIKALI 48
           EFT PP    ALI
Sbjct: 953 EFTGPPLPYAALI 965


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,032
Number of Sequences: 438
Number of extensions: 1239
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3407265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)