Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O22
         (437 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione S-tran...    24   2.1  
DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.       22   8.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   8.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   8.3  

>AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione
           S-transferase u3 protein.
          Length = 218

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
 Frame = +3

Query: 183 YLFPGETPA-EALLSVREL-LDLQITEADVICDIETPADTSEFDALDRDNSSEELL 344
           Y FPG  P+  ALL++R L LD ++   ++    E  AD  EF A++ D++   L+
Sbjct: 7   YHFPGSPPSRSALLALRNLDLDAEVKIVNLFAG-EHLAD--EFVAINPDHTVPTLV 59


>DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.
          Length = 55

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 129 NEPPRRVLVPVGSLYLCDYLFPGETPAEALLSV 227
           NEPPRR    VG    C + F   T  + + +V
Sbjct: 8   NEPPRRTSHLVGRKRTCYFHFTIATDTQNVRTV 40


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +3

Query: 66  FTMHCDALIDDNLLPEEKVCFNEPPRRVLVPVGSLYLCDYLF 191
           + + C AL+  N     +   + P     VPVG L   D  F
Sbjct: 128 YVVFCSALLSHNAFVLARPNLSAPASGEKVPVGQLSPLDLAF 169


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 189  INNHKDTEIPRELTH 145
            I+NH+D ++  EL H
Sbjct: 1166 ISNHQDNKLDHELNH 1180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,377
Number of Sequences: 2352
Number of extensions: 6888
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)