Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O22
         (437 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   5.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.9  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 163 PTGTNTRRGGSLKHTFSSGKRLSSM 89
           PTG++ +  GS   T  + +  SSM
Sbjct: 64  PTGSSPQHSGSSASTSPAARTTSSM 88


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -3

Query: 306 QIQMYPPVFLYHR*HLLQLSVDRVVLSRKVTLQQAFHREIN 184
           Q Q   PV+ Y+   L  +++  V +S+ VTL   F+ +++
Sbjct: 447 QYQQSLPVYQYNDLILPGVTIQNVDVSQLVTLFTDFYVDLD 487


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 297 SEFDALDRDNSSEELLASPQEASQFMYITGIS 392
           S+FDA+   N  ++++      S +M  +GI+
Sbjct: 822 SDFDAILDQNKFKDIIKIKTIGSTYMAASGIT 853


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,793
Number of Sequences: 438
Number of extensions: 2260
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)