Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O21
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022683-1|AAY55099.1|  217|Drosophila melanogaster IP07660p pro...    30   1.1  
AE014297-3284|AAF56105.1|  211|Drosophila melanogaster CG13829-P...    30   1.1  
BT025232-1|ABF17923.1|  993|Drosophila melanogaster FI01005p pro...    28   3.3  
AY122223-1|AAM52735.1|  993|Drosophila melanogaster RE21150p pro...    28   3.3  
AF289998-1|AAG02463.1|  993|Drosophila melanogaster thyroid horm...    28   3.3  
AE014296-1393|AAF50469.2|  993|Drosophila melanogaster CG7999-PA...    28   3.3  

>BT022683-1|AAY55099.1|  217|Drosophila melanogaster IP07660p
           protein.
          Length = 217

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 5/32 (15%)
 Frame = -1

Query: 117 GYTFIILLLRYFCSF-----LATFYSLRFIII 37
           G  FI+LLL  +CS      +ATF++L+F+++
Sbjct: 140 GSVFIVLLLMSYCSLIIGFPIATFFALKFVVL 171


>AE014297-3284|AAF56105.1|  211|Drosophila melanogaster CG13829-PA
           protein.
          Length = 211

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 5/32 (15%)
 Frame = -1

Query: 117 GYTFIILLLRYFCSF-----LATFYSLRFIII 37
           G  FI+LLL  +CS      +ATF++L+F+++
Sbjct: 134 GSVFIVLLLMSYCSLIIGFPIATFFALKFVVL 165


>BT025232-1|ABF17923.1|  993|Drosophila melanogaster FI01005p
           protein.
          Length = 993

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 119 TVTHLLYYYYDIFVRSLQHSTVY 51
           +V HL+Y+   IF R++QH  +Y
Sbjct: 123 SVVHLVYWLLQIFARTVQHYELY 145


>AY122223-1|AAM52735.1|  993|Drosophila melanogaster RE21150p
           protein.
          Length = 993

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 119 TVTHLLYYYYDIFVRSLQHSTVY 51
           +V HL+Y+   IF R++QH  +Y
Sbjct: 123 SVVHLVYWLLQIFARTVQHYELY 145


>AF289998-1|AAG02463.1|  993|Drosophila melanogaster thyroid hormone
           receptor-associatedprotein TRAP100 protein.
          Length = 993

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 119 TVTHLLYYYYDIFVRSLQHSTVY 51
           +V HL+Y+   IF R++QH  +Y
Sbjct: 123 SVVHLVYWLLQIFARTVQHYELY 145


>AE014296-1393|AAF50469.2|  993|Drosophila melanogaster CG7999-PA
           protein.
          Length = 993

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 119 TVTHLLYYYYDIFVRSLQHSTVY 51
           +V HL+Y+   IF R++QH  +Y
Sbjct: 123 SVVHLVYWLLQIFARTVQHYELY 145


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,847,322
Number of Sequences: 53049
Number of extensions: 220140
Number of successful extensions: 388
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)