Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O20
         (388 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   2.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   2.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   4.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   4.9  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   4.9  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    20   8.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   8.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/16 (56%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -2

Query: 150 ERFFHVDQP-LHHTKL 106
           E F+HVDQP ++H +L
Sbjct: 40  ELFWHVDQPTVYHPEL 55


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/16 (56%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = -2

Query: 150 ERFFHVDQP-LHHTKL 106
           E F+HVDQP ++H +L
Sbjct: 40  ELFWHVDQPTVYHPEL 55


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 146 GSFTLISHSIILNYSHHGSN 87
           GSFT   HS +L+ S  G N
Sbjct: 72  GSFTAGCHSNLLSTSPSGQN 91


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 146 GSFTLISHSIILNYSHHGSN 87
           GSFT   HS +L+ S  G N
Sbjct: 72  GSFTAGCHSNLLSTSPSGQN 91


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -1

Query: 271 CSNSSEGQTNFNPTNLKPFFSKRSMIVPTRP 179
           C   +   T  NP ++K   +   M+VP++P
Sbjct: 379 CDRRNGKTTEENPKSIKSGDAAIVMLVPSKP 409


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 271 CSNSSEGQTNFNPTNLKPFFSKRSMIVPTRP 179
           C   +   T  NP ++K   +   M+ PT+P
Sbjct: 379 CDRRTGKTTEENPKSIKSGDAAIVMLQPTKP 409


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +3

Query: 219 GFKLVGLKFVWPSE 260
           GF++   K +WPS+
Sbjct: 203 GFRVDAAKHMWPSD 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,413
Number of Sequences: 438
Number of extensions: 2092
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)