Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O19
         (291 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068500-1|AAH68500.1|  658|Homo sapiens large subunit GTPase 1 ...    31   0.89 
BC040119-1|AAH40119.1|  649|Homo sapiens LSG1 protein protein.         31   0.89 
BC015042-1|AAH15042.1|  648|Homo sapiens Unknown (protein for IM...    31   0.89 
AK002163-1|BAA92116.1|  642|Homo sapiens protein ( Homo sapiens ...    31   0.89 
AL356285-1|CAI15861.1| 1088|Homo sapiens LATS, large tumor suppr...    30   1.2  
AL161613-1|CAH71526.1| 1088|Homo sapiens LATS, large tumor suppr...    30   1.2  
AF207547-1|AAF80561.1| 1088|Homo sapiens serine/threonine kinase...    30   1.2  
AB209897-1|BAD93134.1|  924|Homo sapiens LATS, large tumor suppr...    30   1.2  
AB028019-1|BAA92381.1| 1046|Homo sapiens large tumor suppressor ...    30   1.2  
BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein pr...    28   6.3  
BC060862-1|AAH60862.1|  985|Homo sapiens ring finger protein 111...    28   6.3  
BC020984-1|AAH20984.1|  441|Homo sapiens RNF111 protein protein.       28   6.3  
AK131488-1|BAD18633.1|  602|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AK131304-1|BAD18471.1|  994|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AK095327-1|BAC04531.1|  370|Homo sapiens protein ( Homo sapiens ...    28   6.3  
BX537517-1|CAD97770.1|  295|Homo sapiens hypothetical protein pr...    27   8.3  
BC039121-1|AAH39121.1|  510|Homo sapiens SYNE1 protein protein.        27   8.3  
AL357081-3|CAI41324.1|  675|Homo sapiens RP11-809I23.2 protein.        27   8.3  
AL049548-6|CAI42747.1|  675|Homo sapiens RP11-809I23.2 protein.        27   8.3  
AK056122-1|BAB71097.1|  560|Homo sapiens protein ( Homo sapiens ...    27   8.3  
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.              27   8.3  
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.            27   8.3  

>BC068500-1|AAH68500.1|  658|Homo sapiens large subunit GTPase 1
           homolog (S. cerevisiae) protein.
          Length = 658

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 188 KLNVKFEPGELREAARTFEEARGRIKK 268
           KLN+KF P E R    +FEE++ RIKK
Sbjct: 77  KLNIKFVPAEARTGLLSFEESQ-RIKK 102


>BC040119-1|AAH40119.1|  649|Homo sapiens LSG1 protein protein.
          Length = 649

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 188 KLNVKFEPGELREAARTFEEARGRIKK 268
           KLN+KF P E R    +FEE++ RIKK
Sbjct: 77  KLNIKFVPAEARTGLLSFEESQ-RIKK 102


>BC015042-1|AAH15042.1|  648|Homo sapiens Unknown (protein for
           IMAGE:3920630) protein.
          Length = 648

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 188 KLNVKFEPGELREAARTFEEARGRIKK 268
           KLN+KF P E R    +FEE++ RIKK
Sbjct: 77  KLNIKFVPAEARTGLLSFEESQ-RIKK 102


>AK002163-1|BAA92116.1|  642|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11301 fis, clone PLACE1009908, weakly similar to
           HYPOTHETICAL GTP-BINDING PROTEIN IN SEH1-PRP20
           INTERGENIC ).
          Length = 642

 Score = 30.7 bits (66), Expect = 0.89
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +2

Query: 188 KLNVKFEPGELREAARTFEEARGRIKK 268
           KLN+KF P E R    +FEE++ RIKK
Sbjct: 77  KLNIKFVPAEARTGLLSFEESQ-RIKK 102


>AL356285-1|CAI15861.1| 1088|Homo sapiens LATS, large tumor
           suppressor, homolog 2 (Drosophila) protein.
          Length = 1088

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 170 DASGENKLNVKFEPGELREAARTFEEARGRIKKYTPF 280
           D  G++K  ++  P  +R+ +R  E+   RIK Y+P+
Sbjct: 564 DKGGKDKKQIQTSPVPVRKNSRDEEKRESRIKSYSPY 600


>AL161613-1|CAH71526.1| 1088|Homo sapiens LATS, large tumor
           suppressor, homolog 2 (Drosophila) protein.
          Length = 1088

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 170 DASGENKLNVKFEPGELREAARTFEEARGRIKKYTPF 280
           D  G++K  ++  P  +R+ +R  E+   RIK Y+P+
Sbjct: 564 DKGGKDKKQIQTSPVPVRKNSRDEEKRESRIKSYSPY 600


>AF207547-1|AAF80561.1| 1088|Homo sapiens serine/threonine kinase
           KPM protein.
          Length = 1088

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 170 DASGENKLNVKFEPGELREAARTFEEARGRIKKYTPF 280
           D  G++K  ++  P  +R+ +R  E+   RIK Y+P+
Sbjct: 564 DKGGKDKKQIQTSPVPVRKNSRDEEKRESRIKSYSPY 600


>AB209897-1|BAD93134.1|  924|Homo sapiens LATS, large tumor
           suppressor, homolog 2 variant protein.
          Length = 924

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 170 DASGENKLNVKFEPGELREAARTFEEARGRIKKYTPF 280
           D  G++K  ++  P  +R+ +R  E+   RIK Y+P+
Sbjct: 570 DKGGKDKKQIQTSPVPVRKNSRDEEKRESRIKSYSPY 606


>AB028019-1|BAA92381.1| 1046|Homo sapiens large tumor suppressor 2
           protein.
          Length = 1046

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 170 DASGENKLNVKFEPGELREAARTFEEARGRIKKYTPF 280
           D  G++K  ++  P  +R+ +R  E+   RIK Y+P+
Sbjct: 522 DKGGKDKKQIQTSPVPVRKNSRDEEKRESRIKSYSPY 558


>BX538130-1|CAD98031.1|  986|Homo sapiens hypothetical protein
           protein.
          Length = 986

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPCIIPNTIHAFSQNL 42
           HQ  A    H + PP  QP      +IP+ +HAF   +
Sbjct: 659 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 696


>BC060862-1|AAH60862.1|  985|Homo sapiens ring finger protein 111
           protein.
          Length = 985

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPCIIPNTIHAFSQNL 42
           HQ  A    H + PP  QP      +IP+ +HAF   +
Sbjct: 658 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 695


>BC020984-1|AAH20984.1|  441|Homo sapiens RNF111 protein protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPCIIPNTIHAFSQNL 42
           HQ  A    H + PP  QP      +IP+ +HAF   +
Sbjct: 106 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 143


>AK131488-1|BAD18633.1|  602|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16671 fis, clone THYMU3001428. ).
          Length = 602

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPCIIPNTIHAFSQNL 42
           HQ  A    H + PP  QP      +IP+ +HAF   +
Sbjct: 258 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 295


>AK131304-1|BAD18471.1|  994|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16278 fis, clone NT2RI3001132, highly  similar
           to Mus musculus Arkadia (Arkadia) mRNA. ).
          Length = 994

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPCIIPNTIHAFSQNL 42
           HQ  A    H + PP  QP      +IP+ +HAF   +
Sbjct: 659 HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 696


>AK095327-1|BAC04531.1|  370|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38008 fis, clone CTONG2012452, highly similar to
           Mus musculus Arkadia (Arkadia) mRNA. ).
          Length = 370

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 155 HQRIAPVSLHLHSPPLVQPCKLPPCIIPNTIHAFSQNL 42
           HQ  A    H + PP  QP      +IP+ +HAF   +
Sbjct: 35  HQASACPHSHGNPPPQTQPPPQVDYVIPHPVHAFHSQI 72


>BX537517-1|CAD97770.1|  295|Homo sapiens hypothetical protein
           protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 161 IEKDASGENKLNVKFEPGELREAARTFEEARGRIKKYT 274
           + +  +G++KLN+    GEL     T E+A+G   K T
Sbjct: 179 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 216


>BC039121-1|AAH39121.1|  510|Homo sapiens SYNE1 protein protein.
          Length = 510

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 161 IEKDASGENKLNVKFEPGELREAARTFEEARGRIKKYT 274
           + +  +G++KLN+    GEL     T E+A+G   K T
Sbjct: 227 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 264


>AL357081-3|CAI41324.1|  675|Homo sapiens RP11-809I23.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 161 IEKDASGENKLNVKFEPGELREAARTFEEARGRIKKYT 274
           + +  +G++KLN+    GEL     T E+A+G   K T
Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248


>AL049548-6|CAI42747.1|  675|Homo sapiens RP11-809I23.2 protein.
          Length = 675

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 161 IEKDASGENKLNVKFEPGELREAARTFEEARGRIKKYT 274
           + +  +G++KLN+    GEL     T E+A+G   K T
Sbjct: 211 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 248


>AK056122-1|BAB71097.1|  560|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31560 fis, clone NT2RI2001409, weakly similar to
           DYSTROPHIN. ).
          Length = 560

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 161 IEKDASGENKLNVKFEPGELREAARTFEEARGRIKKYT 274
           + +  +G++KLN+    GEL     T E+A+G   K T
Sbjct: 193 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 230


>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
          Length = 8749

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 161  IEKDASGENKLNVKFEPGELREAARTFEEARGRIKKYT 274
            + +  +G++KLN+    GEL     T E+A+G   K T
Sbjct: 3118 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3155


>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
          Length = 8797

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 161  IEKDASGENKLNVKFEPGELREAARTFEEARGRIKKYT 274
            + +  +G++KLN+    GEL     T E+A+G   K T
Sbjct: 3111 LSESENGQHKLNMMLSKGELLSTLLTKEKAKGIQAKVT 3148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,657,090
Number of Sequences: 237096
Number of extensions: 725842
Number of successful extensions: 1509
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)