Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O16
         (420 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           25   1.1  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   1.1  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   1.5  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    24   2.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   2.6  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   6.0  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    22   7.9  

>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -3

Query: 172 TDVSSAPVSSHPWSDAPRATGPVLTSLMSGCS*ASSGWVRPTRSLW 35
           T  + AP ++  WSD P       T++    +  ++  V PT + W
Sbjct: 195 TTTTHAPTTTTTWSDLPPPPPTTTTTVWIDPTATTTTHVPPTTTTW 240



 Score = 24.2 bits (50), Expect = 2.0
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 160 SAPVSSHPWSDAPRATGPVLTSLMSGCS*ASSGWVRPTRSLW 35
           SAP ++  WSD PR      T++ +  +  ++     T + W
Sbjct: 166 SAPTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTW 207


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 160 SAPVSSHPWSDAPRATGPVLTSLMSGCS*ASSGWVRPTRSLW 35
           SAP ++  WSD PR      T++ +  +  ++     T + W
Sbjct: 166 SAPTTTTTWSDQPRPPTTTTTTVWTDSTATTTTHAPTTTTTW 207


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 183 GEIQLTFRPRRSPRIHGQTRPGQLVPF 103
           G ++ TFR RR+    GQ R G   PF
Sbjct: 544 GWVRNTFRSRRTQLGFGQERTGTSYPF 570


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 251 LAGCVGSYSPAGSARQSNASP 189
           LAGC G  SP G     + SP
Sbjct: 64  LAGCSGYVSPRGGTNSDDFSP 84


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 227  SPAGSARQSNASPAPVKSN*R 165
            SPA  AR S ASP P K + R
Sbjct: 1454 SPARLARSSPASPTPSKKSKR 1474


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = -2

Query: 296 FHVCPVAKVFLLIMILAGCVGSYSPAGSARQSNASPAPV 180
           FH           ++  G  GSY  + +A  + A+ APV
Sbjct: 2   FHTSAAYSDMTAAVVATGNTGSYHQSAAAAAAAAANAPV 40


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = -2

Query: 284 PVAKVFLLIMILAGCVGSY-SPAGSARQSNASPAPVKSN*RFVRAGLLASMVRRA 123
           PVA     + +    V  + + A ++  SNAS +PVKS     +  LLA+    A
Sbjct: 80  PVASPHSALSLSPVSVSKFDTSASTSNSSNASVSPVKSLNGSTKGLLLAAAAAAA 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,196
Number of Sequences: 2352
Number of extensions: 7778
Number of successful extensions: 238
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)