Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O15
         (303 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87455-1|BAA13396.2|  772|Homo sapiens KIAA0266 protein.               30   1.5  
BC122536-1|AAI22537.1|  766|Homo sapiens UTP14, U3 small nucleol...    30   1.5  
BC089407-1|AAH89407.1|  766|Homo sapiens UTP14C protein protein.       30   1.5  
AL139082-4|CAI12891.1|  766|Homo sapiens UTP14, U3 small nucleol...    30   1.5  
L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr...    29   2.7  
BC014987-1|AAH14987.1|  771|Homo sapiens UTP14, U3 small nucleol...    29   2.7  
BC009649-1|AAH09649.1|  771|Homo sapiens UTP14, U3 small nucleol...    29   2.7  
BC001149-1|AAH01149.1|  771|Homo sapiens UTP14, U3 small nucleol...    29   2.7  
AL034405-5|CAI42908.1|  771|Homo sapiens UTP14, U3 small nucleol...    29   2.7  
BC047294-1|AAH47294.1|  567|Homo sapiens IFT172 protein protein.       28   4.7  
BC008024-1|AAH08024.1|  534|Homo sapiens IFT172 protein protein.       28   4.7  
AB033005-1|BAA86493.1| 1090|Homo sapiens KIAA1179 protein protein.     28   4.7  

>D87455-1|BAA13396.2|  772|Homo sapiens KIAA0266 protein.
          Length = 772

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 676 EKRNIHAAAHQVQVLPYPFTHHRQFERTIQTPIGST 711


>BC122536-1|AAI22537.1|  766|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog C (yeast) protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 670 EKRNIHAAAHQVQVLPYPFTHHRQFERTIQTPIGST 705


>BC089407-1|AAH89407.1|  766|Homo sapiens UTP14C protein protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 670 EKRNIHAAAHQVQVLPYPFTHHRQFERTIQTPIGST 705


>AL139082-4|CAI12891.1|  766|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog C (yeast) protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 670 EKRNIHAAAHQVQVLPYPFTHHRQFERTIQTPIGST 705


>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated protein
            1B protein.
          Length = 2468

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +3

Query: 135  DDTLRRAMPQDEGGVPAYTDSAIPLGSQPRAMDHL-IDEDVTIVATVNELT 284
            D+  R   P++      YT S I + S+P  MD +    DV    T NE T
Sbjct: 1102 DEENREDQPEEFTATSGYTQSTIEISSEPTPMDEMSTPRDVMSDETNNEET 1152


>BC014987-1|AAH14987.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 671 EKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGST 706


>BC009649-1|AAH09649.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 671 EKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGST 706


>BC001149-1|AAH01149.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 671 EKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGST 706


>AL034405-5|CAI42908.1|  771|Homo sapiens UTP14, U3 small nucleolar
           ribonucleoprotein, homolog A (yeast) protein.
          Length = 771

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 122 EERAVPARTHAVDLVPVTLTHHVLTFTSLNVPLGDT 15
           E+R + A  H V ++P   THH     ++  P+G T
Sbjct: 671 EKRNIHAAAHQVRVLPYPFTHHWQFERTIQTPIGST 706


>BC047294-1|AAH47294.1|  567|Homo sapiens IFT172 protein protein.
          Length = 567

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 117 LLTIGIDDTLRRAMPQDEGGVPAYTDSAIPLGSQPRAMDHLI 242
           +LT+ +D  L + +P+DE G  AY  S +   +  RA+  LI
Sbjct: 467 VLTVSMDQRLEQVLPRDERG--AYEASLVAASTGVRALPCLI 506


>BC008024-1|AAH08024.1|  534|Homo sapiens IFT172 protein protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 117 LLTIGIDDTLRRAMPQDEGGVPAYTDSAIPLGSQPRAMDHLI 242
           +LT+ +D  L + +P+DE G  AY  S +   +  RA+  LI
Sbjct: 434 VLTVSMDQRLEQVLPRDERG--AYEASLVAASTGVRALPCLI 473


>AB033005-1|BAA86493.1| 1090|Homo sapiens KIAA1179 protein protein.
          Length = 1090

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 117  LLTIGIDDTLRRAMPQDEGGVPAYTDSAIPLGSQPRAMDHLI 242
            +LT+ +D  L + +P+DE G  AY  S +   +  RA+  LI
Sbjct: 990  VLTVSMDQRLEQVLPRDERG--AYEASLVAASTGVRALPCLI 1029


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,516,588
Number of Sequences: 237096
Number of extensions: 698519
Number of successful extensions: 1884
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)