SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O14
         (424 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.5  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.5  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    20   10.0 
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    20   10.0 
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    20   10.0 
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    20   10.0 
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    20   10.0 
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    20   10.0 
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    20   10.0 
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    20   10.0 

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 374 SEDGAPRSPQSSNR 333
           S +G+PRSP+S++R
Sbjct: 318 SNNGSPRSPESNSR 331


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +3

Query: 249 DCLKA--MLYYVVWLG 290
           DC  +  M+Y++ WLG
Sbjct: 355 DCCPSDRMVYFITWLG 370


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +3

Query: 249 DCLKA--MLYYVVWLG 290
           DC  +  M+Y++ WLG
Sbjct: 355 DCCPSDRMVYFITWLG 370


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 108 AFSNGRRGVTYVLENTDGTL 49
           + S  +  +TYV +N +GTL
Sbjct: 206 SISYEQTAITYVWKNDEGTL 225


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 108 AFSNGRRGVTYVLENTDGTL 49
           + S  +  +TYV +N +GTL
Sbjct: 206 SISYEQTAITYVWKNDEGTL 225


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 108 AFSNGRRGVTYVLENTDGTL 49
           + S  +  +TYV +N +GTL
Sbjct: 257 SISYEQTAITYVWKNDEGTL 276


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 108 AFSNGRRGVTYVLENTDGTL 49
           + S  +  +TYV +N +GTL
Sbjct: 206 SISYEQTAITYVWKNDEGTL 225


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +3

Query: 249 DCLKA--MLYYVVWLG 290
           DC  +  M+Y++ WLG
Sbjct: 355 DCCPSDRMVYFITWLG 370


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 43  EQQGTIGIFQNIRNSSTSVREGAS*SGVEDHRRVWSPQQA*SVARQVHARS 195
           E Q  +    + R S       A  + + + RR++SP     VAR+  A S
Sbjct: 641 ENQNCLDASSSRRGSKIGSPTPAESTFIPEERRIYSPITFQDVARRSVANS 691


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.2 bits (40), Expect = 10.0
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 140 EYGLRNKREVWRVKYTLARIRKAARELLTLE 232
           E  L+++REVW ++    R  +   + + LE
Sbjct: 33  EERLQHRREVWLIQQEREREHERLMKKMILE 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,001
Number of Sequences: 438
Number of extensions: 1981
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

- SilkBase 1999-2023 -