Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O11
         (244 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    21   2.2  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   3.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   3.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   3.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   6.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   8.8  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = -3

Query: 197 YRRQHGEHNLSIRRLEDLHQLQRPYAFH 114
           Y RQH ++    + +E + + +R    H
Sbjct: 55  YHRQHSKNEQQRKEMEQMREREREQREH 82


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 122 RMGAEVDADLLGDEWKGYV 178
           R+G  + +D L +  +GYV
Sbjct: 227 RIGLRIQSDSLAENVEGYV 245


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 222 FIGKPCLSLPP 190
           ++G  C+SLPP
Sbjct: 166 WLGAACISLPP 176


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 3.8
 Identities = 7/19 (36%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +1

Query: 13  EGTDRS-HEVERFIPGNGM 66
           EG  ++ + +E ++PGNG+
Sbjct: 407 EGAPQNFYYIEEYLPGNGV 425


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +2

Query: 65  CQKLFEVVDEHKLRIFYEKRMGA--EVDADLL 154
           CQ  F+        +  EKR G   EVD DL+
Sbjct: 43  CQNWFDKFRSGDFSLKDEKRSGRPVEVDDDLI 74


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +2

Query: 32  MKLNVSYPAT 61
           +K++VSYP+T
Sbjct: 339 IKISVSYPST 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,688
Number of Sequences: 438
Number of extensions: 1299
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)