Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O09
         (327 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069535-1|AAL39680.1| 1040|Drosophila melanogaster LD25753p pro...    28   3.2  
AE014297-2839|AAN14361.2| 1040|Drosophila melanogaster CG4058-PA...    28   3.2  
AE014297-2838|AAG22165.3|  978|Drosophila melanogaster CG4058-PB...    28   3.2  

>AY069535-1|AAL39680.1| 1040|Drosophila melanogaster LD25753p
           protein.
          Length = 1040

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = +1

Query: 193 KTDACV--YKDACSDWMRLH 246
           K D CV  YK AC +W RLH
Sbjct: 273 KVDPCVDFYKYACGNWERLH 292


>AE014297-2839|AAN14361.2| 1040|Drosophila melanogaster CG4058-PA,
           isoform A protein.
          Length = 1040

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = +1

Query: 193 KTDACV--YKDACSDWMRLH 246
           K D CV  YK AC +W RLH
Sbjct: 273 KVDPCVDFYKYACGNWERLH 292


>AE014297-2838|AAG22165.3|  978|Drosophila melanogaster CG4058-PB,
           isoform B protein.
          Length = 978

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = +1

Query: 193 KTDACV--YKDACSDWMRLH 246
           K D CV  YK AC +W RLH
Sbjct: 211 KVDPCVDFYKYACGNWERLH 230


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,341,809
Number of Sequences: 53049
Number of extensions: 209415
Number of successful extensions: 473
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 693319869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)