Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_O09
(327 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 2.9
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 2.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 2.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 3.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 5.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 5.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 5.0
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 5.0
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 5.0
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 20 8.8
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 20 8.8
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.4 bits (43), Expect = 2.9
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -2
Query: 263 MYDKHMCNRIQSLHASLYTHASVLT 189
+YDKH + +Y H +VL+
Sbjct: 16 LYDKHRAPKFLGQPTIVYFHVTVLS 40
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 2.9
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 95 YNKL*SLNYFLKYTKNLQRTFKHYL 21
YN + NY Y N ++ +K+Y+
Sbjct: 97 YNNNYNNNYNNNYNNNYKKLYKNYI 121
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 2.9
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 95 YNKL*SLNYFLKYTKNLQRTFKHYL 21
YN + NY Y N ++ +K+Y+
Sbjct: 97 YNNNYNNNYNNNYNNNYKKLYKNYI 121
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 3.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +2
Query: 152 NKQQNWKVLCMHVLKLMRVCIRMHVVIGCG 241
N N+K L +++ + ++ + + V I CG
Sbjct: 344 NNYNNYKKLYYNIINIEQIPVPVPVPIYCG 373
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 5.0
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 187 CVKTDACVYKDACSDWMRLHMCLSYIYVD-AWVMLLH 294
C K + C Y D S + CL++ + AW +++
Sbjct: 222 CEKPEVCDYPDIYSGYEGALRCLAHNGGEIAWTKVIY 258
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 5.0
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 187 CVKTDACVYKDACSDWMRLHMCLSYIYVD-AWVMLLH 294
C K + C Y D S + CL++ + AW +++
Sbjct: 222 CEKPEVCDYPDIYSGYEGALRCLAHNGGEIAWTKVIY 258
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 5.0
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 187 CVKTDACVYKDACSDWMRLHMCLSYIYVD-AWVMLLH 294
C K + C Y D S + CL++ + AW +++
Sbjct: 222 CEKPEVCDYPDIYSGYEGALRCLAHNGGEIAWTKVIY 258
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 20.6 bits (41), Expect = 5.0
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 286 TSPMHPHICMINTCATASNHYM 221
T P+ C++ C+TA+ + M
Sbjct: 146 TLPLRLSFCVVLACSTATVYVM 167
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.6 bits (41), Expect = 5.0
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +3
Query: 249 VFIIHICGCMGDVTSFHFT*IT 314
+F+I GC G + H IT
Sbjct: 62 IFVISFFGCCGAIRESHCMTIT 83
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 19.8 bits (39), Expect = 8.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 221 HVVIGCGCTC 250
HVV+ C C C
Sbjct: 6 HVVMSCCCWC 15
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 19.8 bits (39), Expect = 8.8
Identities = 5/9 (55%), Positives = 7/9 (77%)
Frame = -3
Query: 280 PMHPHICMI 254
P+HPH M+
Sbjct: 103 PLHPHTAMV 111
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,332
Number of Sequences: 438
Number of extensions: 1549
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7217694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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