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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O08
         (299 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32...    56   5e-09
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30...    50   4e-07
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916...    29   0.67 
01_05_0554 + 23221374-23222017,23222158-23222296                       29   0.89 
08_01_0108 - 791835-792398                                             28   1.2  
05_01_0372 - 2913518-2916562,2916674-2917528                           28   1.2  
08_02_0290 + 15383473-15383669,15385057-15385267,15386389-153864...    28   1.6  
03_05_0067 - 20460206-20460703,20461255-20461530                       27   2.7  
05_06_0286 + 26932395-26933155,26934287-26934407,26934496-269347...    27   3.6  
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045           26   4.7  
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909...    26   4.7  
06_03_1512 - 30688098-30688133,30688401-30688537,30688744-306888...    26   4.7  
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589...    26   4.7  
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298...    26   4.7  
02_01_0297 + 1986422-1986570,1986960-1987065,1987188-1987464,198...    26   4.7  
01_07_0098 - 41071997-41072248,41072387-41072519,41072694-410728...    26   4.7  
01_05_0769 - 25042022-25042447,25042856-25043234,25043714-250437...    26   4.7  
01_01_0464 - 3431298-3431315,3431586-3433339,3433340-3433589,343...    26   4.7  
11_04_0147 - 14095039-14095937,14096914-14097379                       26   6.3  
10_08_0786 - 20540061-20542106                                         26   6.3  
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    26   6.3  
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787...    26   6.3  
02_02_0548 - 11403442-11404205,11404520-11404811,11404917-114050...    26   6.3  
12_02_1259 - 27382639-27384284,27386570-27386612                       25   8.3  
10_08_0529 - 18565749-18565804,18566022-18566128,18566206-185664...    25   8.3  
08_01_0279 - 2277487-2278161,2278513-2278662,2278749-2278843,227...    25   8.3  
05_06_0279 + 26896997-26897457,26898100-26898220,26898310-268985...    25   8.3  
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732...    25   8.3  
01_01_0088 + 688792-691441,691629-693013                               25   8.3  

>12_01_0039 -
           319871-319914,320021-320084,320198-320263,320397-320458,
           321211-321298,321401-321461,321542-321625,322332-322630
          Length = 255

 Score = 56.0 bits (129), Expect = 5e-09
 Identities = 32/95 (33%), Positives = 50/95 (52%)
 Frame = +1

Query: 10  ASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRGELISDVSDLITV 189
           AS  Y ++ A+F RD +   GFAK F +++ EER+HA KL+ Y  MRG  +   S +  +
Sbjct: 105 ASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLMKYQNMRGGRVRLQSIVTPL 164

Query: 190 KNFEPVYFNSGADALEAALNMESFVTKSIRGVIDV 294
             F+         A+E AL +E  V + +  +  V
Sbjct: 165 TEFDHPEKGDALYAMELALALEKLVNEKLHNLHSV 199


>11_01_0040 -
           304439-304482,304589-304652,304766-304831,305509-305640,
           305744-305804,305885-306018,306310-306654
          Length = 281

 Score = 49.6 bits (113), Expect = 4e-07
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = +1

Query: 10  ASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRG 153
           AS  Y ++ A+F RD +   GFAK F +++ EER+HA KLI Y  MRG
Sbjct: 137 ASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLIKYQNMRG 184


>07_03_0603 -
           19890664-19890823,19891104-19891329,19891498-19891636,
           19891849-19891942,19892291-19892311,19892506-19892941,
           19893133-19893280,19893369-19893476,19893543-19893659,
           19893960-19894016,19894488-19894553,19895140-19895328,
           19895410-19895523,19895684-19895766,19895857-19896322,
           19896832-19897476
          Length = 1022

 Score = 29.1 bits (62), Expect = 0.67
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 117 MLPLFASRVEEQLRESWTIDHVTGEMGTH 31
           M P  A+ + + LRE  ++D VT  MG+H
Sbjct: 169 MTPAMAASLRDSLREVCSLDDVTERMGSH 197


>01_05_0554 + 23221374-23222017,23222158-23222296
          Length = 260

 Score = 28.7 bits (61), Expect = 0.89
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -1

Query: 257 DSMFRAASKASAPLLKYTGSKF-LTVIRSLTSEISSPLMSK*SISFIACSLSSLAASKNS 81
           D +F     A +P   + G +  L ++ SLT + S+PL S+  +      ++    SKNS
Sbjct: 51  DLIFFPGLGAKSPRSSFLGDRVGLGLVDSLTDDSSTPLGSRKVLLGSEMRITDNVTSKNS 110

Query: 80  FANP 69
           F  P
Sbjct: 111 FTAP 114


>08_01_0108 - 791835-792398
          Length = 187

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
 Frame = +3

Query: 87  LRRG*RREGACDEADRLLAHEGRAYF*RQRSYHRQKLRTCILQ*RGR--C--FGGCSEHG 254
           LRR  RR GA   A+ ++A + R  + R+RS  RQ+ R    + R R  C   GGC   G
Sbjct: 88  LRRPRRRGGARGRAEVVVAGKRRRSWRRRRSRTRQRRRRSRRRRRRRRTCGGGGGCGRGG 147

Query: 255 IVRNK 269
             R +
Sbjct: 148 DARGR 152


>05_01_0372 - 2913518-2916562,2916674-2917528
          Length = 1299

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = -3

Query: 249 VQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLHRML-PLFA-SRVEEQLR 76
           V S    +  A+E+   E  + +K  +   +  P   V D    M+ P+ A S VEE   
Sbjct: 250 VVSEANGVAAAVELAVEEKLEDNKGEEEEMEAKPEPVVDDTSSEMIAPVSAESAVEESTE 309

Query: 75  ESWTIDHVTGEMGTH 31
           +  T+D  + EM  H
Sbjct: 310 KEQTVDDTSSEMIAH 324


>08_02_0290 +
           15383473-15383669,15385057-15385267,15386389-15386440,
           15386545-15386863,15387022-15387121,15387391-15387657,
           15387780-15387857,15387943-15388032,15388119-15388168,
           15388267-15388366,15388777-15388875,15389023-15389136,
           15389238-15389412,15389726-15390132,15390565-15390639,
           15391412-15391438
          Length = 786

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -3

Query: 198 EVFDGDKIADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLRESW 67
           E F  D+I+ V  +L   E  VD+L    P      E  L ESW
Sbjct: 695 ETFSVDRISPVIERLQRLEGKVDELGNKPPEIPLEKERSLLESW 738


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 133 DYLLMRGELISDVSDLITVKNFEPVY 210
           DY +  G+L SDV+DLI    F+  Y
Sbjct: 159 DYTIFVGDLASDVTDLILQDTFKAHY 184


>05_06_0286 +
           26932395-26933155,26934287-26934407,26934496-26934772,
           26934934-26935094
          Length = 439

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 6/29 (20%)
 Frame = +3

Query: 219 RGRCFGGCSE------HGIVRNKEHQRRH 287
           +G CFGGC E      + ++RN++++R H
Sbjct: 382 QGSCFGGCHEINRRIDYVMIRNQDYERCH 410


>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
          Length = 1294

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -3

Query: 225 GPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDH 55
           G  +E++   VF G    D  N  S  +Q+V +L    PL    V   LR + +  H
Sbjct: 383 GENLELFSHSVFSGQNPQDFPNLKSVGKQIVKKLGG-CPLVTKVVGGHLRSNMSFQH 438


>10_07_0061 +
           12489552-12489674,12490761-12490836,12490916-12490980,
           12491089-12491166,12492156-12492236,12492813-12492974,
           12493328-12493426,12493509-12494797,12495063-12495286,
           12495373-12495500,12495596-12495634,12495724-12497178
          Length = 1272

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 198 EVFDG-DKIADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDHVTGE 43
           E  DG DK  D    ++P   V+DQ     P  + +   +  + W     +GE
Sbjct: 451 EQMDGMDKSKDTLQAMAPENSVLDQQQPQAPHLSQQAGPRNMQQWQNPRFSGE 503


>06_03_1512 -
           30688098-30688133,30688401-30688537,30688744-30688834,
           30689265-30690815
          Length = 604

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +3

Query: 3   TRRVRTISGNGCPFLP*RDQSSRIREAVLRRG*RREG-------ACDEADRLLAHEGRAY 161
           +R +RT+  N    L  RD+ SR R+ + RR   RE         C+E + LL   GR+Y
Sbjct: 426 SRELRTLLANTGALLNGRDRVSRSRK-LDRRILSRENISSALVDVCEECESLLVEAGRSY 484


>03_02_0143 -
           5888005-5888088,5888818-5888949,5889485-5889634,
           5890540-5890710,5890840-5891007,5891139-5891234,
           5891777-5891839,5891949-5892114,5892207-5892274,
           5892646-5892789,5893111-5893176,5893329-5893520,
           5894567-5894657,5895241-5895329,5895521-5895583,
           5895698-5895823,5895902-5895991,5896059-5896181,
           5896503-5896619,5896704-5896904,5897643-5897723,
           5897897-5897977,5898083-5898184,5898264-5898488,
           5898571-5898726,5898798-5899010,5899306-5899455,
           5900082-5900204,5900299-5900364,5900555-5900620,
           5900686-5900817,5900891-5900965,5901355-5901438,
           5901516-5901668,5901741-5901806,5902044-5902205,
           5902272-5902388,5902495-5902566,5902702-5902761,
           5902869-5902985,5904131-5904430,5904518-5904622,
           5905710-5905775,5905853-5906297,5906399-5906567,
           5906684-5906736,5906819-5906925
          Length = 1981

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -1

Query: 194 FLTVIRSLTSEISSPLMSK*S-ISFIACSLSS-LAASKNSFANPGRLITSREKWAPIARY 21
           ++  +++L +E++S    + S ++ +   L+  +  +KN       ++T+ EKW  I R 
Sbjct: 493 YVAPMKALAAEVTSTFSRRLSPLNLVVRELTGDMQLTKNEIEETQMIVTTPEKWDVITRK 552

Query: 20  CTD 12
            +D
Sbjct: 553 SSD 555


>02_05_0702 -
           31027908-31027958,31028062-31029311,31029665-31029842,
           31029955-31030017,31031597-31031704,31031772-31031836,
           31031928-31032015,31032104-31032157,31032234-31032380,
           31033358-31033429,31034077-31034226,31034317-31034430,
           31034762-31034875,31035925-31036077,31037437-31037529,
           31038202-31038318,31038984-31039086,31039192-31039376,
           31039448-31039522,31040451-31040534,31041547-31041588,
           31041668-31041847,31042109-31042162,31042239-31042280,
           31042869-31042967,31043040-31043174,31043325-31043427,
           31045061-31045134,31045227-31045270,31045393-31045471,
           31045592-31045705,31045842-31045946,31046027-31046161,
           31046447-31046546,31046870-31046883,31046936-31047004,
           31047079-31047182,31047299-31047347,31047931-31048023,
           31048102-31048210,31048619-31048755,31048851-31048928,
           31049015-31049104,31049402-31049467,31049546-31049638,
           31049711-31049839,31050024-31050122,31051366-31051512,
           31051605-31051910
          Length = 2050

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 11/55 (20%), Positives = 25/55 (45%)
 Frame = -3

Query: 216 IEVYRFEVFDGDKIADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDHV 52
           IE+ +       ++  V  K      +++ LHR + ++    EEQ +    ++H+
Sbjct: 646 IELKKITDDAASRVEKVMKKSEEQAIMIESLHRSVAMYRKLCEEQQKSRSNVEHI 700


>02_01_0297 +
           1986422-1986570,1986960-1987065,1987188-1987464,
           1987805-1988305,1989010-1990016,1990131-1990781,
           1991337-1991633,1991735-1992013,1993070-1993198,
           1993291-1993491,1993651-1993793,1993878-1994190,
           1994349-1994488,1995320-1995398,1995484-1995753,
           1996208-1996425,1996521-1996632
          Length = 1623

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -3

Query: 246 QSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLHRM 115
           Q ++QSI P  ++ + EV D  +  + ++    HEQ++ Q H M
Sbjct: 390 QLNMQSIQPQPQI-KTEVLDQPEKMNFQSSQLTHEQLIRQQHSM 432


>01_07_0098 -
           41071997-41072248,41072387-41072519,41072694-41072886,
           41072975-41073049,41073140-41073266,41073613-41073833,
           41073957-41074110
          Length = 384

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -3

Query: 231 SIGPAIEVYRFEVFDGDKIADVRNKLSPHEQVVDQLHRMLPLFASRV 91
           S GP   VY+  + DG  +A  R   SP +  VD++ R+  ++   V
Sbjct: 94  SFGP---VYKGLLLDGTVVAVKRRVASPRQDFVDEVKRLSEIWHRNV 137


>01_05_0769 -
           25042022-25042447,25042856-25043234,25043714-25043763,
           25044222-25044442,25045085-25045385
          Length = 458

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = -3

Query: 204 RFEVFDGDKIADVRNKLSPHEQVV-----DQLHRMLPLFASRVEEQLRESWT 64
           R+ +F GD   +VR      ++ +     D + R+LP+F+  VEE  + S+T
Sbjct: 55  RYRLFTGDVPENVRLNREARKKPLPLGCHDIIPRVLPMFSKAVEEHGKPSFT 106


>01_01_0464 -
           3431298-3431315,3431586-3433339,3433340-3433589,
           3433716-3434041,3434297-3434618
          Length = 889

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 18/65 (27%), Positives = 30/65 (46%)
 Frame = -1

Query: 281 PLMLFVTNDSMFRAASKASAPLLKYTGSKFLTVIRSLTSEISSPLMSK*SISFIACSLSS 102
           PLML + +  +    S ++A    +TG+    V+  L  + S+ L  K S S    S S+
Sbjct: 10  PLMLILLHTQLIIVPSSSAATYANHTGALPPAVVPCLPDQASALLRLKRSFSITKNSSST 69

Query: 101 LAASK 87
             + K
Sbjct: 70  FGSWK 74


>11_04_0147 - 14095039-14095937,14096914-14097379
          Length = 454

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 201 FEVFDGDKIADVRNKLSPHEQVVDQLHRMLPL 106
           F+  +GD I  +R++LS     +  L++++PL
Sbjct: 207 FDFIEGDNICRIRDELSIPVFAIGPLNKLIPL 238


>10_08_0786 - 20540061-20542106
          Length = 681

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 112 EHAMKLIDYLLMRGELISDVSDLITVKNFEP 204
           +H + L+D LL R  L+ + SDL+T    EP
Sbjct: 447 KHYVCLVD-LLARSGLVEEASDLLTSMKAEP 476


>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 79  KLFFDAASEEREHAMKLIDYLLMRGELISDVSDLITVKNFEPVYFN-SGADALEAALNME 255
           +L + +A E+R+      DY +  G+L +DV+D I  + F   Y +  GA  +   + M 
Sbjct: 169 RLNWASAGEKRDDTP---DYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMR 225

Query: 256 S 258
           S
Sbjct: 226 S 226


>05_05_0230 -
           23476919-23477372,23477656-23477695,23478578-23478700,
           23479114-23479151,23479289-23479674,23479875-23481053,
           23481805-23481928,23482733-23482779
          Length = 796

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 SKASAPLLKYTGSKFLTVIRSLTSEISSPLMSK*SISFIACSLSSLAASKN-SFANPGRL 60
           S ++ P +  + S+  T  R      S+P + +      + S+SSL +S N   AN GR 
Sbjct: 245 SSSTVPSMSRSSSRSSTPTRQPAMRSSAPAVGRSPSVGRSSSISSLTSSINRPAANGGR- 303

Query: 59  ITSREKWAPIARYCTDAPR 3
             S    AP +R  +  PR
Sbjct: 304 -NSAPSSAPSSRPSSPGPR 321


>02_02_0548 -
           11403442-11404205,11404520-11404811,11404917-11405016,
           11405049-11405458
          Length = 521

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = -3

Query: 261 ERFHVQSSLQSIGPAIEVYRFEVFDGDKIADVRNKLSPHE-QVVDQLHRML 112
           +RFH +   +++ PA   YR +VF  D+  ++  + SP   Q +++ H+ L
Sbjct: 298 KRFHGEVFERNLWPASRAYRKDVF--DRHFNIMKEASPRSMQWIEENHQHL 346


>12_02_1259 - 27382639-27384284,27386570-27386612
          Length = 562

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -1

Query: 293 TSMTPLM-LFVTNDSMFRAASKASAPLLKYTGSKFLTVIRSLTSEISSPLMSK*SISFIA 117
           +++ PL+  F+ +  + R A+ A+A +  + G   LT+  ++ S    P  S  S S   
Sbjct: 57  SNLAPLLGAFLCDAYLGRYATLAAASIASFLGMLVLTLTAAIPSLHPPPCASSSSTSCQG 116

Query: 116 CSLSSLAASKNSFA 75
            +   LAA   SFA
Sbjct: 117 PTHRQLAALLASFA 130


>10_08_0529 -
          18565749-18565804,18566022-18566128,18566206-18566410,
          18566500-18566812
          Length = 226

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 85 TASRILDD*SRHGRNGHPLPDIVRT 11
          TA+RIL+    H R G  + DIVRT
Sbjct: 9  TAARILELDPAHPRAGRVIDDIVRT 33


>08_01_0279 -
           2277487-2278161,2278513-2278662,2278749-2278843,
           2279367-2279865
          Length = 472

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 131 ISFIACSLSSLAASKNSFANPGRLITSREKW 39
           + FI  +    AASK +FA+  R I + E+W
Sbjct: 84  LRFIGKTAEEYAASKAAFASRPRRIETAEEW 114


>05_06_0279 +
           26896997-26897457,26898100-26898220,26898310-26898586,
           26898735-26898895
          Length = 339

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 6/29 (20%)
 Frame = +3

Query: 219 RGRCFGGCSE------HGIVRNKEHQRRH 287
           +G CFGGC E      + + RN++++R H
Sbjct: 282 QGSCFGGCHEINRRIDYVMTRNQDYERCH 310


>03_05_0567 -
           25672780-25672965,25673043-25673135,25673237-25673297,
           25673385-25673495,25673640-25673825,25673909-25675287,
           25675393-25675776,25675813-25676061,25676147-25676386
          Length = 962

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 130 IDYLLMRG-ELISDVSDLITVKNFEPVYFNSGADALE 237
           IDYL   G  ++ D  DL+ + +   ++F  G DA E
Sbjct: 456 IDYLTADGISVLGDAVDLVILWHKNDIFFGLGTDAGE 492


>01_01_0088 + 688792-691441,691629-693013
          Length = 1344

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 183 DKIADVRNKLSPHEQVVDQLH 121
           D +AD+ NK    E V+D+LH
Sbjct: 61  DNLADLCNKADEAEDVLDELH 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,058,575
Number of Sequences: 37544
Number of extensions: 140167
Number of successful extensions: 413
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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