Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O08
         (299 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   3.3  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    22   4.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    22   5.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 119  ACSLSSLAASKNSFANPGRLITSREK 42
            A + S+ A +K SFA  G  +T REK
Sbjct: 1259 ATNSSTGATTKKSFAADGTDVTVREK 1284


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 206 YTSIAGPMLWRL 241
           Y SI GP LW+L
Sbjct: 40  YKSIPGPTLWQL 51


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = -3

Query: 186  GDKIADVRNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDHV 52
            GD    V   LS H      LHR     +SR      E  T+DHV
Sbjct: 940  GDVDYFVTQVLSGHGCFRSYLHRFNRASSSRCPACKDEDETVDHV 984


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 295,194
Number of Sequences: 2352
Number of extensions: 4999
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19123236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)