Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O06
         (330 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   0.56 
AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    23   3.9  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    22   5.2  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    22   5.2  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    22   6.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   9.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   9.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 0.56
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +1

Query: 19  DTDTSAEHIVGEPAVKRRFNIKILSRCSSVSV 114
           +  TSA  + G PA + RFN+ +L     VS+
Sbjct: 301 EKSTSAGKVTGTPAQQDRFNVLLLILFLCVSI 332


>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 104 EEHRDRILILNRRLTAGSPTIC 39
           +E R   + + RRL  G P++C
Sbjct: 44  QEQRKLAMKVKRRLPGGPPSVC 65


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 118 VGRQFYFEQIRVLKAGSKCCLNI 186
           VGR  Y+ ++ + +  S+ C+N+
Sbjct: 124 VGRPIYYLEMLISQFSSRGCINV 146


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +1

Query: 118 VGRQFYFEQIRVLKAGSKCCLNI 186
           VGR  Y+ ++ + +  S+ C+N+
Sbjct: 124 VGRPIYYLEMLISQFSSRGCINV 146


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 310 SKYFTYNVAIRMPPVI 263
           +KY  Y+ A+R+P VI
Sbjct: 337 AKYSNYDAAVRIPLVI 352


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 174 LLEYFVHGIIEYD 212
           L+ +F HG + YD
Sbjct: 852 LIHFFTHGFLTYD 864


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 174 LLEYFVHGIIEYD 212
           L+ +F HG + YD
Sbjct: 853 LIHFFTHGFLTYD 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,416
Number of Sequences: 2352
Number of extensions: 5455
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)