SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_O04
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase ...    24   2.7  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    24   2.7  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   4.7  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   6.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   8.2  

>CR954257-8|CAJ14159.1|  562|Anopheles gambiae putative esterase
           protein.
          Length = 562

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +3

Query: 33  PGGDTIFGKILRKEISAKFVYEDDQCVAFHDVNPQAPTH 149
           P G+ I  + L      +F+Y  D+ V  H     APT+
Sbjct: 391 PLGNDIMVEWLTFHTDQQFIYAIDKTVRLHAQRSSAPTY 429


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 129 SHHEKLHIDHLHRRILQIFLCVIFSQI*YRHREQ 28
           +H   L +  LH  +   F+ V+   + YR REQ
Sbjct: 230 AHANALGMKQLHDDVSGFFMRVVKDTVEYREREQ 263


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 138 APTHILVIPRKPISQLSKAGDEDE 209
           APT I  +P+K ++++ K  D  E
Sbjct: 325 APTTIPTVPKKSLAEVGKVYDRCE 348


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +3

Query: 141 PTHILVIPRKPISQLSKAGDEDEQLLGIKFICIYSN 248
           P +I+   ++P  +    G   +Q  G  ++C Y N
Sbjct: 98  PDYIVQEEQEPAKKTQTRGKRTQQSTGSTYMCNYCN 133


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = -3

Query: 248  IRIDTYKFNTQQLLIFI 198
            +R+ +Y +  QQL++F+
Sbjct: 2611 VRVTSYIYKDQQLIVFV 2627


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 487,450
Number of Sequences: 2352
Number of extensions: 10188
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -