Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_O04
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical pr... 85 3e-17
U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical ... 28 2.5
Z81050-4|CAB02854.1| 329|Caenorhabditis elegans Hypothetical pr... 28 3.4
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 28 3.4
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical p... 27 7.8
Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical p... 27 7.8
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z71261-3|CAA95802.1| 130|Caenorhabditis elegans Hypothetical
protein F21C3.3 protein.
Length = 130
Score = 84.6 bits (200), Expect = 3e-17
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +3
Query: 42 DTIFGKILRKEISAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLG 221
DT+FGKI+RKEI AK ++EDD+ +AFHDV+PQAP H LVIP++ I L A D D L+G
Sbjct: 20 DTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAALIG 79
>U53148-1|AAB37071.1| 175|Caenorhabditis elegans Hypothetical
protein C26F1.7 protein.
Length = 175
Score = 30.7 bits (66), Expect = 0.48
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +3
Query: 66 RKEISAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLL 218
+KE+ K E+ CV +D+ P+A H LV+ ++ I++ + D LL
Sbjct: 20 KKELQLK---ENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLL 67
>Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 362 FEFTLDKENKLYIYRLYIEMYLGIRCNFYITTDTLIL---FIRIDTYKFNTQQLL 207
FEF DKE Y + L+++ + + + T L++ FIR+ K T + L
Sbjct: 91 FEFLSDKEGYSYFWALFLKCHAMLSIALHAITLYLVVLMAFIRLSAMKLTTSRWL 145
>AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -3
Query: 362 FEFTLDKENKLYIYRLYIEMYLGIRCNFYITTDTLIL---FIRIDTYKFNTQQLL 207
FEF DKE Y + L+++ + + + T L++ FIR+ K T + L
Sbjct: 91 FEFLSDKEGYSYFWALFLKCHAMLSIALHAITLYLVVLMAFIRLSAMKLTTSRWL 145
>Z81050-4|CAB02854.1| 329|Caenorhabditis elegans Hypothetical
protein C50B6.5 protein.
Length = 329
Score = 27.9 bits (59), Expect = 3.4
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -3
Query: 416 TVNSVSNGCGFMLIGPVVFEFTLDKENKLYIYRLYIEMYLGIRCNFYITTDTLILF--IR 243
T+N++ + G+ +I +F F N +YL I N YI TL+LF +
Sbjct: 96 TINALIHQTGYSIIEMYMFRFKASTYN---FQSTCFYVYLQI--NLYIYRITLVLFFVVN 150
Query: 242 IDTYKFNTQQLLI 204
I TY + Q +I
Sbjct: 151 ITTYNISLGQQII 163
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 298 KYISMYNLYIYSLFSLSKVNSKTTGPISMKPQPFDTEL 411
K ISM N + LF SK++ KT+ P++ P D +L
Sbjct: 311 KKISMCNRSLKWLFLHSKISQKTSRPLNKYRLPSDDQL 348
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 340 SLSKVNSKTTGPISMKPQPFDTELT 414
S SK+++ T P S KP P T +T
Sbjct: 834 STSKISTTPTSPTSSKPTPTSTSMT 858
>Z74030-19|CAA98449.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 45 TIFGKILRKEISAKFVYEDDQCVAF 119
T+F KIL+ E + Y QCVA+
Sbjct: 349 TMFNKILQLECEKVWTYGSSQCVAY 373
>Z72508-10|CAA96644.2| 841|Caenorhabditis elegans Hypothetical
protein F28H7.10a protein.
Length = 841
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 45 TIFGKILRKEISAKFVYEDDQCVAF 119
T+F KIL+ E + Y QCVA+
Sbjct: 349 TMFNKILQLECEKVWTYGSSQCVAY 373
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 48 IFGKILRKEISAKFVYEDDQCVAFHDVNPQAPTHILVIPRKPISQLSKAGDEDEQLLGIK 227
++GK RK + + +CVA DV+ + ILV P + K + +LL K
Sbjct: 440 MYGKYGRKRRAREDHENGGKCVATPDVSRRIMAVILVQPLPLYDEKEKLAHDISELLNSK 499
Query: 228 F 230
F
Sbjct: 500 F 500
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,550,241
Number of Sequences: 27780
Number of extensions: 221126
Number of successful extensions: 496
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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