Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N24
(328 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 138 1e-33
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 136 4e-33
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 133 3e-32
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 130 3e-31
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 62 1e-10
03_01_0034 + 318432-318825,318902-319851 62 1e-10
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 62 1e-10
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 62 1e-10
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 62 1e-10
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 62 1e-10
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 61 2e-10
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 58 1e-09
01_06_1014 - 33810112-33811995 31 0.16
12_01_0285 + 2120130-2121204,2122842-2123116 30 0.37
11_01_0281 + 2086674-2087652,2089200-2089483 30 0.37
11_01_0277 + 2060328-2061061,2061360-2061420,2061560-2061679,206... 30 0.37
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 1.5
07_03_1248 - 25165929-25166891,25169159-25169473 28 2.0
04_03_0324 - 14394427-14394546,14394949-14395062,14396378-14396494 28 2.0
01_06_1344 + 36474144-36474296,36474786-36474858,36475309-364754... 27 2.6
06_03_0664 - 23265981-23266325 27 3.5
01_07_0325 - 42745611-42745700,42745939-42745971,42746069-427461... 27 3.5
03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508 27 4.6
12_01_0273 - 1989058-1989349,1989730-1989837,1990315-1990508,199... 26 6.1
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 26 6.1
11_01_0272 - 2042490-2042781,2043146-2043203,2043385-2043401,204... 26 6.1
03_01_0642 - 4702726-4703052,4703127-4703193,4703280-4703360,470... 26 6.1
10_08_0324 + 16747117-16747330,16747432-16747559,16747675-167477... 26 8.0
09_02_0602 - 11118788-11119178,11119262-11119451,11119590-111196... 26 8.0
08_02_1383 + 26594304-26594386,26595927-26595972,26596108-265962... 26 8.0
07_03_0502 + 18826595-18826660,18826815-18826885,18828963-188290... 26 8.0
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590... 26 8.0
03_02_0915 + 12360079-12360095,12360225-12361353 26 8.0
01_06_1210 + 35430143-35430796,35430912-35431004,35431397-354315... 26 8.0
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 138 bits (334), Expect = 1e-33
Identities = 62/71 (87%), Positives = 68/71 (95%)
Frame = -2
Query: 327 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 148
LAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 147 LEKDYEEVGMD 115
LEKDYEEVG +
Sbjct: 428 LEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 136 bits (329), Expect = 4e-33
Identities = 60/72 (83%), Positives = 69/72 (95%)
Frame = -2
Query: 327 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 148
LAKVQRAVCM+SN+T++ E ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 147 LEKDYEEVGMDS 112
LEKDYEEVG +S
Sbjct: 428 LEKDYEEVGAES 439
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 133 bits (322), Expect = 3e-32
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = -2
Query: 327 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 148
LAKV+RAVCM+SN TA+AE ++R+D KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 449 LAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 508
Query: 147 LEKDYEEVGMD 115
LEKDYEEVG +
Sbjct: 509 LEKDYEEVGAE 519
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 130 bits (314), Expect = 3e-31
Identities = 58/71 (81%), Positives = 67/71 (94%)
Frame = -2
Query: 327 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 148
LAKVQRAVCM+SN+T++ E ++R+D KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 147 LEKDYEEVGMD 115
LEKDYEEVG +
Sbjct: 428 LEKDYEEVGSE 438
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 62.1 bits (144), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 318 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 139
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 138 DYEE 127
+Y++
Sbjct: 421 EYQQ 424
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 62.1 bits (144), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 318 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 139
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 138 DYEE 127
+Y++
Sbjct: 421 EYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 61.7 bits (143), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 318 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 139
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 138 DYEE 127
+Y++
Sbjct: 421 EYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 61.7 bits (143), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = -2
Query: 318 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 139
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 138 DYEE 127
+Y++
Sbjct: 421 EYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 61.7 bits (143), Expect = 1e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -2
Query: 309 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 130
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 385 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 444
Query: 129 E 127
+
Sbjct: 445 Q 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 61.7 bits (143), Expect = 1e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -2
Query: 309 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 130
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 129 E 127
+
Sbjct: 424 Q 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 61.3 bits (142), Expect = 2e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = -2
Query: 309 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 130
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 544 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 603
Query: 129 E 127
+
Sbjct: 604 Q 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 58.4 bits (135), Expect = 1e-09
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = -2
Query: 309 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 130
A + N+T+I E + R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L +Y+
Sbjct: 380 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQ 439
Query: 129 E 127
+
Sbjct: 440 Q 440
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.16
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 231 AKRAFVHWYVGEGMEEGEFSEAREDL 154
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>12_01_0285 + 2120130-2121204,2122842-2123116
Length = 449
Score = 30.3 bits (65), Expect = 0.37
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 146 SRRTTKKSAWTPPRERVREPKSTKPMNMFEGGS 48
S++ S WT P R + K+ +P N GGS
Sbjct: 103 SKKKNSNSVWTRPNSRKGKKKAKQPANALAGGS 135
>11_01_0281 + 2086674-2087652,2089200-2089483
Length = 420
Score = 30.3 bits (65), Expect = 0.37
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 146 SRRTTKKSAWTPPRERVREPKSTKPMNMFEGGS 48
S++ S WT P R + K+ +P N GGS
Sbjct: 106 SKKKNSNSVWTRPNSRKGKKKAKQPANALAGGS 138
>11_01_0277 +
2060328-2061061,2061360-2061420,2061560-2061679,
2061947-2062112,2062229-2062635
Length = 495
Score = 30.3 bits (65), Expect = 0.37
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 146 SRRTTKKSAWTPPRERVREPKSTKPMNMFEGGS 48
S++ S WT P R + K+ +P N GGS
Sbjct: 104 SKKKNSNSVWTRPNSRKGKKKAKQPANALAGGS 136
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 179 SPSSIPSPTYQCTKARLAYIKS 244
S S+ PSPT+ C K R Y KS
Sbjct: 145 SSSAAPSPTWGCPKCRFPYPKS 166
>07_03_1248 - 25165929-25166891,25169159-25169473
Length = 425
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 148 SGQVLTSFGELTLLHTLTDVPVHEGALSVHQVELVVETSPGLGDSG 285
S V S G ++L H D+ +++ L VHQVEL ++ + D G
Sbjct: 231 SNYVQDSSGSVSLQHH-QDMSLNQNHLFVHQVELTLDQIEEIKDDG 275
>04_03_0324 - 14394427-14394546,14394949-14395062,14396378-14396494
Length = 116
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 325 RQGAARRLHVVQYHRYRRGLGSSRP 251
R A R LH+ QYHRY G+ + P
Sbjct: 14 RNRAYRLLHLDQYHRYEAGVEARDP 38
>01_06_1344 +
36474144-36474296,36474786-36474858,36475309-36475481,
36475613-36475667,36475750-36475766
Length = 156
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 128 KSAWTPPRERVREPKSTKPMNMFE 57
KS WTPP+ R K K N ++
Sbjct: 78 KSQWTPPKSRTVYTKDNKQSNQYD 101
>06_03_0664 - 23265981-23266325
Length = 114
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 73 GLVLFGSLTLSLGGVHADFFVVLLESGQVLTSFGELTLLHTLT 201
GL L + G H ++LL+SG+VL + LLH LT
Sbjct: 17 GLRRRAQLLAAAGRYHRRRRLLLLDSGRVLMLLAVVALLHLLT 59
>01_07_0325 -
42745611-42745700,42745939-42745971,42746069-42746182,
42746325-42746417,42746502-42746597,42746820-42746924,
42747027-42747284,42748740-42749402
Length = 483
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 182 VSSPKLVRTWPLSRRTTKKSAWTPPRERVREPKSTKPMN 66
+S P + P +++ KK W PPR R + + +K +N
Sbjct: 86 LSGPSQEKAAPHNKQAKKKKTWVPPR-RKKSFRFSKALN 123
>03_02_0666 + 10282355-10282403,10282692-10282963,10283125-10283508
Length = 234
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 200 PTYQCTKARLAYIKSNLWSRRAQASAIAVV 289
P Y+ R+ Y+KSN W A + I +
Sbjct: 110 PNYKIENYRVLYLKSNCWHEGASSEIIDAI 139
>12_01_0273 -
1989058-1989349,1989730-1989837,1990315-1990508,
1990601-1990717,1990801-1990966,1991323-1991490,
1991734-1993052
Length = 787
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 164 VRTWPLSRRTTKKSAWTPP 108
V TWP TKK W PP
Sbjct: 330 VLTWPGVEPVTKKPVWRPP 348
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 164 VRTWPLSRRTTKKSAWTPP 108
V TWP TKK W PP
Sbjct: 333 VLTWPGVEPVTKKPVWLPP 351
>11_01_0272 -
2042490-2042781,2043146-2043203,2043385-2043401,
2043572-2043765,2043858-2043974,2044059-2044224,
2044430-2044597,2044741-2046047
Length = 772
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 164 VRTWPLSRRTTKKSAWTPP 108
V TWP TKK W PP
Sbjct: 331 VLTWPGVEPVTKKPVWRPP 349
>03_01_0642 -
4702726-4703052,4703127-4703193,4703280-4703360,
4703582-4703718,4703936-4704143,4704664-4704891,
4705310-4705450,4705538-4705794
Length = 481
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 85 FGSLTLSLGGVHADFFVVLLESGQVLTSF 171
FG++ L H D F++ L S Q+L+++
Sbjct: 184 FGNICKPLTWSHGDIFLMCLSSAQILSAY 212
>10_08_0324 + 16747117-16747330,16747432-16747559,16747675-16747744,
16747832-16747988,16748089-16748701,16749132-16749653,
16749686-16750279,16750359-16750709,16750808-16751395
Length = 1078
Score = 25.8 bits (54), Expect = 8.0
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +1
Query: 82 LFGSLTLSLGGVHADFFVVLLESGQVLTSFGELTLLHTLTDVPVHEGALSVHQVELVVET 261
+F L LGGV +F V + +FGEL L T + + ++ V +V
Sbjct: 936 VFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTTLLVPPTTLIIINMVGIVAGV 995
Query: 262 SPGLGDSGG 288
S + + G
Sbjct: 996 SDAVNNGYG 1004
>09_02_0602 -
11118788-11119178,11119262-11119451,11119590-11119658,
11119890-11120016,11120134-11120399,11120760-11120872,
11121693-11121764,11121860-11121998,11124277-11124360,
11125278-11125771,11127604-11128187
Length = 842
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 176 NSPSSIPSPTYQCTKARLAYIKSNLWSRRAQASAIAVVLDNMQTAR 313
++PS+ P+ Y C LAY K N W + + + +D + T +
Sbjct: 351 DNPSTFPTD-YTCKIISLAYNKLNRWIKELRLIKVPHKVDAIMTIK 395
>08_02_1383 +
26594304-26594386,26595927-26595972,26596108-26596222,
26596645-26596712,26596814-26597440,26597527-26597631,
26597715-26598062
Length = 463
Score = 25.8 bits (54), Expect = 8.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 199 TDVPVHEGALSVHQVELVVETSPGLGDSGGIGQHADGALHLG 324
T +PV +G EL+ G GD GG + A+ LG
Sbjct: 180 TGLPVRDGGRLSQLQELLGNVMQGDGDGGGDSRKGSTAVSLG 221
>07_03_0502 +
18826595-18826660,18826815-18826885,18828963-18829056,
18829575-18831521
Length = 725
Score = 25.8 bits (54), Expect = 8.0
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 209 GTSVRVWRRVSSPKLVRTWPLSRRTTKKSAWTP 111
G S+R+WR P+ P++R+ + W P
Sbjct: 275 GHSIRIWRDPWLPRDFSRRPITRKGNCRIKWVP 307
>04_04_0827 -
28457858-28458028,28458513-28458669,28458984-28459083,
28459204-28459231,28459321-28459396,28461276-28461355,
28461642-28461805,28461897-28462056,28462154-28462277,
28462901-28463941,28464141-28464259,28464512-28464823,
28465222-28465425,28466068-28466751,28467301-28467474
Length = 1197
Score = 25.8 bits (54), Expect = 8.0
Identities = 8/34 (23%), Positives = 21/34 (61%)
Frame = +2
Query: 206 YQCTKARLAYIKSNLWSRRAQASAIAVVLDNMQT 307
+ C R ++ +N+WSR + +++ +L +++T
Sbjct: 88 FSCPADRTSHRVANVWSRSSSTTSVGNILKSIRT 121
>03_02_0915 + 12360079-12360095,12360225-12361353
Length = 381
Score = 25.8 bits (54), Expect = 8.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 113 PPRERVREPKSTKPMNMFEGGSHTDT 36
PP E + E + KPM+ GGS +D+
Sbjct: 42 PPAETIVELTTKKPMSQGGGGSSSDS 67
>01_06_1210 +
35430143-35430796,35430912-35431004,35431397-35431546,
35431817-35432076,35433378-35433641,35434475-35434682
Length = 542
Score = 25.8 bits (54), Expect = 8.0
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 255 DHKFDLMYAKRAFVHWY 205
D+ FD+++ R VHWY
Sbjct: 371 DNSFDVIHCARCRVHWY 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,215,843
Number of Sequences: 37544
Number of extensions: 125773
Number of successful extensions: 587
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 435246480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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