Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N22
         (281 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280372-1|AAQ21368.1|  519|Homo sapiens cytochrome P450 4A22 pr...    29   3.6  
AK131366-1|BAD18517.1|  126|Homo sapiens protein ( Homo sapiens ...    29   3.6  
BC022562-1|AAH22562.1|  241|Homo sapiens Unknown (protein for IM...    28   4.8  
AF260332-1|AAG44663.1|  280|Homo sapiens DC33 protein.                 28   4.8  
AE006465-11|AAK61265.1|  436|Homo sapiens unknown protein.             28   4.8  
BC042525-1|AAH42525.1|  410|Homo sapiens BTB (POZ) domain contai...    28   6.3  
AF353674-1|AAK39520.1|  475|Homo sapiens BTB domain protein prot...    28   6.3  
AF173358-1|AAF36536.1|  334|Homo sapiens glucocorticoid receptor...    28   6.3  

>AY280372-1|AAQ21368.1|  519|Homo sapiens cytochrome P450 4A22
           protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
 Frame = +1

Query: 46  HCSIKQLDIALPI---REATLGRNRHFNCFVSRRSDEFAFVVAQWRGPRHEHVAVGAVHR 216
           H S+  LD  +      + ++  +R+   ++   SD  + V  + R   HE+ A+ ++  
Sbjct: 188 HVSLMTLDTIMKSAFSHQGSIQVDRNSQSYIQAISDLSSLVFCRMRNAFHENDAIYSLTS 247

Query: 217 SSWWCQRSCRL 249
           +  W  R+C+L
Sbjct: 248 AGRWTHRACQL 258


>AK131366-1|BAD18517.1|  126|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16408 fis, clone UTERU2035978. ).
          Length = 126

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 175 GPRHEHVAVGAVHRSSWWCQRSCRLPGR 258
           GP H HV+ G +H    W    C  PGR
Sbjct: 10  GPSHHHVSPGLLHAPPTWSPHFC--PGR 35


>BC022562-1|AAH22562.1|  241|Homo sapiens Unknown (protein for
           IMAGE:4794059) protein.
          Length = 241

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 251 GRRHERWHHQLER*TAPTATCSCRGPRHWATTNANSS 141
           G+R    HH+L +   P  + S +GPR W+ T ++ S
Sbjct: 115 GKRPHPLHHKLPQ-QEPVFSSSSQGPRCWSKTRSSPS 150


>AF260332-1|AAG44663.1|  280|Homo sapiens DC33 protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 243 TRALAPPARAVNSTDCHVFMPGSAPLGH 160
           TRAL P A +  S+  H+  PG  PL H
Sbjct: 227 TRALRPTASSAASSSSHLPEPGKDPLPH 254


>AE006465-11|AAK61265.1|  436|Homo sapiens unknown protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -3

Query: 258 ASWETTRALAPPARAVNSTDCHVFMPGSAPLGHHKRKFVRTAADEAVEVTIAPQGCLTNG 79
           A+W +   +A P  A++ T      PGS P         +    ++   T  PQGCL  G
Sbjct: 7   AAWPSPGIMALPCPALSCTPSE--SPGSPPALGRPVTLQQQLQQKSRVSTGPPQGCLQGG 64

Query: 78  QG 73
           +G
Sbjct: 65  EG 66


>BC042525-1|AAH42525.1|  410|Homo sapiens BTB (POZ) domain
           containing 6 protein.
          Length = 410

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 185 MNTWQSVLFTALAGGANARVVSQDAPVTPAN 277
           +NT ++V+F A+   A A    Q  P+TP N
Sbjct: 166 LNTKEAVVFEAVLNWAEAECKRQGLPITPRN 196


>AF353674-1|AAK39520.1|  475|Homo sapiens BTB domain protein
           protein.
          Length = 475

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 185 MNTWQSVLFTALAGGANARVVSQDAPVTPAN 277
           +NT ++V+F A+   A A    Q  P+TP N
Sbjct: 231 LNTKEAVVFEAVLNWAEAECKRQGLPITPRN 261


>AF173358-1|AAF36536.1|  334|Homo sapiens glucocorticoid receptor
           AF-1 coactivator-1 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 185 MNTWQSVLFTALAGGANARVVSQDAPVTPAN 277
           +NT ++V+F A+   A A    Q  P+TP N
Sbjct: 192 LNTKEAVVFEAVLNWAEAECKRQGLPITPRN 222


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,017,611
Number of Sequences: 237096
Number of extensions: 1060021
Number of successful extensions: 2345
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2345
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)