Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N22
(281 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060694-1|AAL28242.1| 384|Drosophila melanogaster GH13735p pro... 31 0.22
AE013599-2223|AAF58039.1| 714|Drosophila melanogaster CG3666-PA... 31 0.22
BT024381-1|ABC86443.1| 118|Drosophila melanogaster IP05938p pro... 29 1.2
AE014298-1564|AAF48005.1| 116|Drosophila melanogaster CG15199-P... 29 1.2
AY119585-1|AAM50239.1| 326|Drosophila melanogaster LD14730p pro... 28 2.0
AE014298-938|AAF46192.1| 1125|Drosophila melanogaster CG14441-PA... 28 2.0
AE014134-3299|AAF53930.2| 326|Drosophila melanogaster CG31673-P... 28 2.0
S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription ... 27 4.7
BT025195-1|ABF17886.2| 851|Drosophila melanogaster FI01125p pro... 27 4.7
AY122200-1|AAM52712.1| 261|Drosophila melanogaster LD47384p pro... 27 4.7
AY069807-1|AAL39952.1| 851|Drosophila melanogaster SD04735p pro... 27 4.7
AF209706-1|AAF21440.1| 261|Drosophila melanogaster Rab-related ... 27 4.7
AE014296-2641|AAS64986.1| 851|Drosophila melanogaster CG5444-PD... 27 4.7
AE014296-2640|AAO41248.1| 851|Drosophila melanogaster CG5444-PC... 27 4.7
AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB... 27 4.7
AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA... 27 4.7
AE013599-3617|AAF47018.1| 261|Drosophila melanogaster CG3870-PA... 27 4.7
AY071006-1|AAL48628.1| 258|Drosophila melanogaster RE09091p pro... 26 8.2
AE014296-356|AAF47568.1| 258|Drosophila melanogaster CG13922-PA... 26 8.2
>AY060694-1|AAL28242.1| 384|Drosophila melanogaster GH13735p
protein.
Length = 384
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 14 LCPDGTLQALTTAVLNNSTSPCPFVRQPWGAI 109
LCPDG LQ L N++ PC +V +PW +
Sbjct: 271 LCPDGHLQPL------NASQPCVWVAKPWPVV 296
>AE013599-2223|AAF58039.1| 714|Drosophila melanogaster CG3666-PA
protein.
Length = 714
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 14 LCPDGTLQALTTAVLNNSTSPCPFVRQPWGAI 109
LCPDG LQ L N++ PC +V +PW +
Sbjct: 271 LCPDGHLQPL------NASQPCVWVAKPWPVV 296
>BT024381-1|ABC86443.1| 118|Drosophila melanogaster IP05938p
protein.
Length = 118
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 28 HTSGAYHCSIKQLDIALPIREATLGRNRHFNCFVSRRSDEFAFVV 162
H S A HC ++LD+A+P+ L + C +D++ ++
Sbjct: 37 HPSLAEHCLYEELDLAVPLNGYVLPSGQQGYCIRLECTDDYLLLI 81
>AE014298-1564|AAF48005.1| 116|Drosophila melanogaster CG15199-PA
protein.
Length = 116
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 28 HTSGAYHCSIKQLDIALPIREATLGRNRHFNCFVSRRSDEFAFVV 162
H S A HC ++LD+A+P+ L + C +D++ ++
Sbjct: 35 HPSLAEHCLYEELDLAVPLNGYVLPSGQQGYCIRLECTDDYLLLI 79
>AY119585-1|AAM50239.1| 326|Drosophila melanogaster LD14730p
protein.
Length = 326
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = -3
Query: 273 AGVTGASWETTRALAPPARAVNSTDCHVFMPGSAPLGHHKRKFVRTAADEAVEVTIAPQG 94
AG+ A+ R ++ + ++ D F PLGH AD A+ + IA
Sbjct: 65 AGILDAAGSQLRCVSTMSSGIDFVDIPEFQKRGIPLGHTPGVVKNAVADLAIGLMIAAGR 124
Query: 93 CLTNGQGDVE 64
G+ ++E
Sbjct: 125 HFHAGRTEIE 134
>AE014298-938|AAF46192.1| 1125|Drosophila melanogaster CG14441-PA
protein.
Length = 1125
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 219 RAVNSTDCHVFMPGSAPLGHHKR 151
R + +DCHV P LG HKR
Sbjct: 389 RPMQCSDCHVLFPTGHHLGWHKR 411
>AE014134-3299|AAF53930.2| 326|Drosophila melanogaster CG31673-PA
protein.
Length = 326
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = -3
Query: 273 AGVTGASWETTRALAPPARAVNSTDCHVFMPGSAPLGHHKRKFVRTAADEAVEVTIAPQG 94
AG+ A+ R ++ + ++ D F PLGH AD A+ + IA
Sbjct: 65 AGILDAAGSQLRCVSTMSSGIDFVDIPEFQKRGIPLGHTPGVVKNAVADLAIGLMIAAGR 124
Query: 93 CLTNGQGDVE 64
G+ ++E
Sbjct: 125 HFHAGRTEIE 134
>S63550-1|AAB27433.1| 921|Drosophila melanogaster transcription
initiation factorTFIID 110 kda protein.
Length = 921
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 217 SGEQHRLPRVHAGVRAIGPPQT 152
+G +LP++ A +R IGP QT
Sbjct: 388 AGLSQQLPKIQAQIRPIGPSQT 409
>BT025195-1|ABF17886.2| 851|Drosophila melanogaster FI01125p
protein.
Length = 851
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 217 SGEQHRLPRVHAGVRAIGPPQT 152
+G +LP++ A +R IGP QT
Sbjct: 318 AGLSQQLPKIQAQIRPIGPSQT 339
>AY122200-1|AAM52712.1| 261|Drosophila melanogaster LD47384p
protein.
Length = 261
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 187 EHVAVGAVHRSSWWC 231
EH+A+G V R SW C
Sbjct: 246 EHIALGEVERPSWCC 260
>AY069807-1|AAL39952.1| 851|Drosophila melanogaster SD04735p
protein.
Length = 851
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 217 SGEQHRLPRVHAGVRAIGPPQT 152
+G +LP++ A +R IGP QT
Sbjct: 318 AGLSQQLPKIQAQIRPIGPSQT 339
>AF209706-1|AAF21440.1| 261|Drosophila melanogaster Rab-related
GTP-binding proteinChrowded protein.
Length = 261
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 187 EHVAVGAVHRSSWWC 231
EH+A+G V R SW C
Sbjct: 246 EHIALGEVERPSWCC 260
>AE014296-2641|AAS64986.1| 851|Drosophila melanogaster CG5444-PD,
isoform D protein.
Length = 851
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 217 SGEQHRLPRVHAGVRAIGPPQT 152
+G +LP++ A +R IGP QT
Sbjct: 318 AGLSQQLPKIQAQIRPIGPSQT 339
>AE014296-2640|AAO41248.1| 851|Drosophila melanogaster CG5444-PC,
isoform C protein.
Length = 851
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 217 SGEQHRLPRVHAGVRAIGPPQT 152
+G +LP++ A +R IGP QT
Sbjct: 318 AGLSQQLPKIQAQIRPIGPSQT 339
>AE014296-2639|AAF49536.1| 921|Drosophila melanogaster CG5444-PB,
isoform B protein.
Length = 921
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 217 SGEQHRLPRVHAGVRAIGPPQT 152
+G +LP++ A +R IGP QT
Sbjct: 388 AGLSQQLPKIQAQIRPIGPSQT 409
>AE014296-2638|AAF49535.1| 921|Drosophila melanogaster CG5444-PA,
isoform A protein.
Length = 921
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 217 SGEQHRLPRVHAGVRAIGPPQT 152
+G +LP++ A +R IGP QT
Sbjct: 388 AGLSQQLPKIQAQIRPIGPSQT 409
>AE013599-3617|AAF47018.1| 261|Drosophila melanogaster CG3870-PA
protein.
Length = 261
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 187 EHVAVGAVHRSSWWC 231
EH+A+G V R SW C
Sbjct: 246 EHIALGEVERPSWCC 260
>AY071006-1|AAL48628.1| 258|Drosophila melanogaster RE09091p
protein.
Length = 258
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 201 DCHVFMPGSAPLGHHKRKFVRTAADEAV 118
+ V G+AP+G HK K+ R E V
Sbjct: 182 ELQVLFYGNAPVGFHKYKYPRNQRTETV 209
>AE014296-356|AAF47568.1| 258|Drosophila melanogaster CG13922-PA
protein.
Length = 258
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 201 DCHVFMPGSAPLGHHKRKFVRTAADEAV 118
+ V G+AP+G HK K+ R E V
Sbjct: 182 ELQVLFYGNAPVGFHKYKYPRNQRTETV 209
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,165,452
Number of Sequences: 53049
Number of extensions: 303444
Number of successful extensions: 795
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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