Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N19
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   4.1  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    22   7.2  

>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 8/27 (29%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 193 AEHCCAVL-CCAVLHGSAARAVLTSRH 116
           A +CC+++ CC +L        +T++H
Sbjct: 52  ASNCCSIVLCCVLLLTLTLTVAVTAQH 78


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 114 RCREVRTARAADPCSTAQHSTAQQCSASPLY 206
           RC E   A  AD C  A H+  + C   P +
Sbjct: 233 RCEEDLRALGADTCVVAAHA-VELCYGWPAF 262


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,896
Number of Sequences: 2352
Number of extensions: 5939
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)