Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N19
         (399 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p pro...    29   3.0  
AE014296-1808|AAN11924.1|  233|Drosophila melanogaster CG32056-P...    29   3.0  
AE014296-1807|AAN11923.1|  332|Drosophila melanogaster CG32056-P...    29   3.0  
AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-P...    29   3.0  
AY119104-1|AAM50964.1| 1151|Drosophila melanogaster RE07981p pro...    27   7.0  
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    27   7.0  
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    27   7.0  
AY118764-1|AAM50624.1|  425|Drosophila melanogaster GH09876p pro...    27   9.2  
AE014134-3010|AAF53735.2|  425|Drosophila melanogaster CG10650-P...    27   9.2  

>AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p
           protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 280 LLSKFTYL*YNNEYRDKNRAHFEIKYKGEAEHCCAVLCC 164
           LL  FT    NN++  KN    ++ +  E   CC   CC
Sbjct: 214 LLEAFTGFETNNKFTIKNALGQKVYFAAEDNDCCTRNCC 252


>AE014296-1808|AAN11924.1|  233|Drosophila melanogaster CG32056-PB,
           isoform B protein.
          Length = 233

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 280 LLSKFTYL*YNNEYRDKNRAHFEIKYKGEAEHCCAVLCC 164
           LL  FT    NN++  KN    ++ +  E   CC   CC
Sbjct: 31  LLEAFTGFETNNKFTIKNALGQKVYFAAEDNDCCTRNCC 69


>AE014296-1807|AAN11923.1|  332|Drosophila melanogaster CG32056-PC,
           isoform C protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 280 LLSKFTYL*YNNEYRDKNRAHFEIKYKGEAEHCCAVLCC 164
           LL  FT    NN++  KN    ++ +  E   CC   CC
Sbjct: 130 LLEAFTGFETNNKFTIKNALGQKVYFAAEDNDCCTRNCC 168


>AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-PA,
           isoform A protein.
          Length = 416

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -3

Query: 280 LLSKFTYL*YNNEYRDKNRAHFEIKYKGEAEHCCAVLCC 164
           LL  FT    NN++  KN    ++ +  E   CC   CC
Sbjct: 214 LLEAFTGFETNNKFTIKNALGQKVYFAAEDNDCCTRNCC 252


>AY119104-1|AAM50964.1| 1151|Drosophila melanogaster RE07981p
           protein.
          Length = 1151

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +3

Query: 39  IGICNAKCSGRLVIFVMLRNVVVVSRCREVRTARAADPCSTAQHSTAQQCSASPLYLIS 215
           +G+   + SG L + +++ N+V V R  E  T+ + D  S +        S+SP+  +S
Sbjct: 475 LGVSVRQSSGELALRMVVLNIVEVDRNSESSTSVSNDSGSVSSGGGQLMKSSSPMVNVS 533


>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
           ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +3

Query: 39  IGICNAKCSGRLVIFVMLRNVVVVSRCREVRTARAADPCSTAQHSTAQQCSASPLYLIS 215
           +G+   + SG L + +++ N+V V R  E  T+ + D  S +        S+SP+  +S
Sbjct: 475 LGVSVRQSSGELALRMVVLNIVEVDRNSESSTSVSNDSGSVSSGGGQLMKSSSPMVNVS 533


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
           protein.
          Length = 4876

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +3

Query: 39  IGICNAKCSGRLVIFVMLRNVVVVSRCREVRTARAADPCSTAQHSTAQQCSASPLYLIS 215
           +G+   + SG L + +++ N+V V R  E  T+ + D  S +        S+SP+  +S
Sbjct: 475 LGVSVRQSSGELALRMVVLNIVEVDRNSESSTSVSNDSGSVSSGGGQLMKSSSPMVNVS 533


>AY118764-1|AAM50624.1|  425|Drosophila melanogaster GH09876p
           protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 TARAADPCSTAQHSTAQQCSAS 197
           T +  DPC+    ST   CSAS
Sbjct: 136 TRQCGDPCAAGTESTCSSCSAS 157


>AE014134-3010|AAF53735.2|  425|Drosophila melanogaster CG10650-PA
           protein.
          Length = 425

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 132 TARAADPCSTAQHSTAQQCSAS 197
           T +  DPC+    ST   CSAS
Sbjct: 136 TRQCGDPCAAGTESTCSSCSAS 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,762,848
Number of Sequences: 53049
Number of extensions: 234781
Number of successful extensions: 434
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)