Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N18
         (286 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   2.2  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    22   3.9  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   3.9  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    21   6.7  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            21   8.9  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            21   8.9  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            21   8.9  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            21   8.9  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            21   8.9  

>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 222 PVVRAAAPVYTF 257
           P V  AAPVYTF
Sbjct: 789 PAVSTAAPVYTF 800


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 230 YYWLVFAGAFGLRVR 186
           Y W+  AGA GLR R
Sbjct: 207 YPWMAIAGANGLRRR 221


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 185 SSCKETTHDCFVFLIHLL**TTRDIYKF 102
           SSCK++T   FVFL   +  + R IY +
Sbjct: 53  SSCKQSTSLSFVFLCCCVPSSERLIYYY 80


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = -3

Query: 281 LGFFLVITESVDWCCCAYYWL-VFAGAFGLRVRSS 180
           L  FL      DW  CA  W+ V + AF   + SS
Sbjct: 398 LQHFLKYLLDADWSVCAGNWMWVSSSAFERLLDSS 432


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 SSCKETTHDCFVFLIHLL 132
           S+  E  H+CFVF+ + L
Sbjct: 116 SNGTEDRHECFVFISNKL 133


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 SSCKETTHDCFVFLIHLL 132
           S+  E  H+CFVF+ + L
Sbjct: 116 SNGTEDRHECFVFISNKL 133


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 SSCKETTHDCFVFLIHLL 132
           S+  E  H+CFVF+ + L
Sbjct: 116 SNGTEDRHECFVFISNKL 133


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 SSCKETTHDCFVFLIHLL 132
           S+  E  H+CFVF+ + L
Sbjct: 116 SNGTEDRHECFVFISNKL 133


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 185 SSCKETTHDCFVFLIHLL 132
           S+  E  H+CFVF+ + L
Sbjct: 116 SNGTEDRHECFVFISNKL 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,106
Number of Sequences: 2352
Number of extensions: 3650
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 16950141
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)