Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N18
         (286 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL391834-11|CAM21148.1| 1673|Homo sapiens DENN/MADD domain conta...    28   6.3  
AL391834-4|CAM21141.1|  258|Homo sapiens DENN/MADD domain contai...    28   6.3  
AL391834-3|CAM21140.1|  670|Homo sapiens DENN/MADD domain contai...    28   6.3  
AL391834-2|CAM21139.1|  791|Homo sapiens DENN/MADD domain contai...    28   6.3  
AL391834-1|CAM21138.1| 1146|Homo sapiens DENN/MADD domain contai...    28   6.3  
AL161909-3|CAH70581.2| 1673|Homo sapiens DENN/MADD domain contai...    28   6.3  
AK125842-1|BAC86313.1| 1557|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AK025705-1|BAB15221.1|  791|Homo sapiens protein ( Homo sapiens ...    28   6.3  
AK000627-1|BAA91294.1|  258|Homo sapiens protein ( Homo sapiens ...    28   6.3  

>AL391834-11|CAM21148.1| 1673|Homo sapiens DENN/MADD domain containing
            4C protein.
          Length = 1673

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234  AAAPVYTFSDDEEETKR 284
            A A  Y++SDDEEET R
Sbjct: 1143 AVASAYSYSDDEEETNR 1159


>AL391834-4|CAM21141.1|  258|Homo sapiens DENN/MADD domain
           containing 4C protein.
          Length = 258

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234 AAAPVYTFSDDEEETKR 284
           A A  Y++SDDEEET R
Sbjct: 14  AVASAYSYSDDEEETNR 30


>AL391834-3|CAM21140.1|  670|Homo sapiens DENN/MADD domain
           containing 4C protein.
          Length = 670

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234 AAAPVYTFSDDEEETKR 284
           A A  Y++SDDEEET R
Sbjct: 140 AVASAYSYSDDEEETNR 156


>AL391834-2|CAM21139.1|  791|Homo sapiens DENN/MADD domain
           containing 4C protein.
          Length = 791

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234 AAAPVYTFSDDEEETKR 284
           A A  Y++SDDEEET R
Sbjct: 325 AVASAYSYSDDEEETNR 341


>AL391834-1|CAM21138.1| 1146|Homo sapiens DENN/MADD domain
           containing 4C protein.
          Length = 1146

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234 AAAPVYTFSDDEEETKR 284
           A A  Y++SDDEEET R
Sbjct: 616 AVASAYSYSDDEEETNR 632


>AL161909-3|CAH70581.2| 1673|Homo sapiens DENN/MADD domain containing
            4C protein.
          Length = 1673

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234  AAAPVYTFSDDEEETKR 284
            A A  Y++SDDEEET R
Sbjct: 1143 AVASAYSYSDDEEETNR 1159


>AK125842-1|BAC86313.1| 1557|Homo sapiens protein ( Homo sapiens cDNA
            FLJ43854 fis, clone TESTI4007064. ).
          Length = 1557

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234  AAAPVYTFSDDEEETKR 284
            A A  Y++SDDEEET R
Sbjct: 1027 AVASAYSYSDDEEETNR 1043


>AK025705-1|BAB15221.1|  791|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22052 fis, clone HEP09477. ).
          Length = 791

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234 AAAPVYTFSDDEEETKR 284
           A A  Y++SDDEEET R
Sbjct: 325 AVASAYSYSDDEEETNR 341


>AK000627-1|BAA91294.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20620 fis, clone KAT04876. ).
          Length = 258

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 234 AAAPVYTFSDDEEETKR 284
           A A  Y++SDDEEET R
Sbjct: 14  AVASAYSYSDDEEETNR 30


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,968,557
Number of Sequences: 237096
Number of extensions: 489202
Number of successful extensions: 731
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)