Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N16
(332 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0078 + 20727684-20728036,20728871-20728895,20729218-207293... 91 3e-19
03_02_0002 + 4853886-4854812 76 8e-15
05_07_0002 - 26979873-26980823 56 9e-09
07_03_0520 + 19014731-19015795 31 0.30
10_06_0078 + 10416950-10417174,10417595-10417679,10417782-104179... 29 0.69
04_04_0373 - 24785799-24786200,24787979-24788161,24790909-247911... 29 0.69
03_05_1045 - 29914581-29914829,29914840-29916083,29919055-299191... 28 1.6
12_01_0500 + 3966456-3968556,3968640-3969087,3969524-3969718,396... 27 2.8
07_03_1173 - 24526632-24526755,24527057-24527226,24527441-245275... 27 2.8
03_05_0936 - 28955486-28955683,28956320-28956424,28956550-289566... 27 2.8
02_05_1321 - 35695474-35696161,35696315-35696547 27 2.8
01_06_0752 + 31704071-31704787 27 2.8
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 27 3.7
03_05_0761 - 27515441-27515650,27515967-27516074,27516666-275168... 27 3.7
03_05_0569 + 25698128-25698432,25699257-25699273,25699725-25699807 27 3.7
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 27 3.7
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 27 3.7
01_01_0657 + 5015435-5016292,5016352-5016657 27 3.7
11_06_0610 - 25449085-25453284 27 4.9
08_02_0934 + 22747742-22748644 27 4.9
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 26 6.4
08_01_0892 - 8778097-8778236,8778390-8778486,8778568-8778747,877... 26 6.4
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 26 6.4
03_05_0675 + 26630466-26632070 26 6.4
02_04_0430 + 22834405-22834839 26 6.4
01_06_0096 - 26408159-26408911,26409012-26409440 26 6.4
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 26 8.5
>09_06_0078 +
20727684-20728036,20728871-20728895,20729218-20729347,
20729441-20729571,20729654-20729742,20730127-20730203,
20730279-20730412
Length = 312
Score = 90.6 bits (215), Expect = 3e-19
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 53 CYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPL 232
C H + D+ AGD +C+ECGLV+ +D SEWRTF+NE S DP RVGGP NPL
Sbjct: 9 CKKHTEVAF--DHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVGGPTNPL 66
Query: 233 LSGGDLSTIIG-PGRGDASFDSFGVSKYQNR 322
L+ G LST+I P F S + ++QNR
Sbjct: 67 LTDGGLSTVIAKPNGAQGEFLSSSLGRWQNR 97
>03_02_0002 + 4853886-4854812
Length = 308
Score = 75.8 bits (178), Expect = 8e-15
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Frame = +2
Query: 53 CYA---HPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGV--DPSRVGG 217
CY H ++ D+ GD IC+EC LV+ +R ID SEWRTFS+ SG DP+RVGG
Sbjct: 10 CYCPECHRTTVVVVDHATGDTICTECALVLEERYIDETSEWRTFSDAGSGEDRDPNRVGG 69
Query: 218 PENPLLSGGDLSTIIGPGRGDA 283
+P LS +L T++ P + A
Sbjct: 70 CSDPFLSHAELGTVVAPAKRQA 91
>05_07_0002 - 26979873-26980823
Length = 316
Score = 55.6 bits (128), Expect = 9e-09
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +2
Query: 77 LIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNE--KSGVDPSRVGGPENPLL 235
++ D+ GD IC+EC LV+ R ID SEWRTF+N+ DP+RVG +P L
Sbjct: 21 VVLDHTTGDTICTECALVLDARYIDETSEWRTFANDGASDDRDPNRVGDRADPFL 75
>07_03_0520 + 19014731-19015795
Length = 354
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 77 LIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDL 250
++ D+ GD IC+EC +V+G+ + + + G D ++PLL G D+
Sbjct: 20 MVLDHDTGDAICTECAIVLGNGNDPRRPAVASAATKHGGAD---APADDDPLLQGSDV 74
>10_06_0078 +
10416950-10417174,10417595-10417679,10417782-10417900,
10418200-10418287,10419400-10419452,10419876-10420015,
10420094-10420166,10420243-10420311,10420632-10420844,
10422304-10422498,10422581-10422658,10423456-10423590
Length = 490
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 300 PKLSNDASPLPGPMIVERSP---PDNNGFSGPPTREGSTP 190
PKL S +PG + V++SP P+ + GP T+ G P
Sbjct: 443 PKLQAKFSHVPGGLAVQKSPRFVPNPEKYWGPKTKAGRQP 482
>04_04_0373 -
24785799-24786200,24787979-24788161,24790909-24791170,
24791565-24791656
Length = 312
Score = 29.5 bits (63), Expect = 0.69
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 190 WC*SLSCWWTRESIII 237
WC L WWTRE++ +
Sbjct: 26 WCIGLQAWWTRETVAV 41
>03_05_1045 -
29914581-29914829,29914840-29916083,29919055-29919199,
29919727-29919792,29919882-29920108,29920204-29920310,
29920428-29920502,29920600-29920688,29920768-29920848,
29921631-29921702,29922056-29922178
Length = 825
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 125 LVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGG 244
LV GD G EW +E++ S G ENP +GG
Sbjct: 291 LVEGDMAAAGGEEWVAVVDEETEDPSSEQMGEENPWATGG 330
>12_01_0500 +
3966456-3968556,3968640-3969087,3969524-3969718,
3969891-3970119
Length = 990
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 131 VGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGRGD-ASFDS 295
VGD S+ +TFS+E + V PE+P D + G GD AS D+
Sbjct: 163 VGDGETTTTSKNQTFSDENGKTEGGEVVSPEDPDKQSADDAPTDGKDTGDQASGDA 218
>07_03_1173 -
24526632-24526755,24527057-24527226,24527441-24527506,
24527858-24527953,24528340-24528438,24528730-24528819,
24529016-24529111,24529561-24529654,24530254-24530351,
24530395-24530679
Length = 405
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 65 PDAPLIEDYRAGDMICSECGLVVGDRVID-VGSEWRTFSNEKSGVDPSRVGGPENPLLSG 241
PDA L + G + E V V+D +G+E R E+ PS VGG NP+ G
Sbjct: 315 PDAILRQVRECGHIPHVEKPSEVLKHVLDFLGTERRPEKAEQGSSLPSTVGGDNNPVGGG 374
Query: 242 GD 247
+
Sbjct: 375 SE 376
>03_05_0936 -
28955486-28955683,28956320-28956424,28956550-28956693,
28957078-28957356,28957480-28957587,28958288-28958567,
28958724-28960029,28961301-28962342
Length = 1153
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 62 HPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWR 169
HPD P +ED + G + G+ + D+GSE R
Sbjct: 537 HPDDPFVEDDQHGSV--RSIGVGISSDAADIGSEVR 570
>02_05_1321 - 35695474-35696161,35696315-35696547
Length = 306
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 209 VGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNI 331
VGGPE+ SG DL+ +I G S+D + K RN+
Sbjct: 187 VGGPEDATFSGADLAALIRSKYG-RSYDVTLIKKEFMGRNL 226
>01_06_0752 + 31704071-31704787
Length = 238
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 182 EKSGVDPSRVGGPENPLLSGGDLSTIIGPGR 274
+++ P RV P + GG+ S+ GPGR
Sbjct: 2 DRTSAVPGRVSDPGSAWFGGGERSSSAGPGR 32
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 300 PKLSNDASPLPGPMIVERSPPDNNGFSGPPTREGSTPDFSLLNVLH 163
P++S SP P PM++ PP + GPP S P S N+ +
Sbjct: 281 PQMSYGYSPYP-PMMMPPPPPPEYLY-GPPGMRSSPPQESYSNMFN 324
>03_05_0761 -
27515441-27515650,27515967-27516074,27516666-27516839,
27517185-27517469,27517688-27517920,27519422-27520139
Length = 575
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 95 AGDMICSECGLVVGDRVIDVGSEWRTFSN 181
AGD + CGL +G V VGS R +N
Sbjct: 144 AGDALALPCGLGLGSHVTVVGSPRRVAAN 172
>03_05_0569 + 25698128-25698432,25699257-25699273,25699725-25699807
Length = 134
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 164 WRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGRGD 280
WR+ S G PSR G E+ + G + + G G GD
Sbjct: 4 WRSKSGG-GGASPSRANGGEDDQVPRGHVPMVAGCGGGD 41
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3
Query: 300 PKLSNDASPLPGPMIVERSPPDNNGFSGPPTREGSTPDFSL 178
P L PLP P ++ R PP F+ PP +TP SL
Sbjct: 261 PFLLRPPPPLPVPGVICRPPPSPPYFAPPPR---ATPTVSL 298
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 300 PKLSNDASPLPGPMIVERSPPDNNGFSG-PPTREGSTP 190
P S+ ++P P P + +PP N G G PP GS P
Sbjct: 1170 PTNSSGSAPSP-PSPSQSAPPANTGGGGSPPPSHGSPP 1206
>01_01_0657 + 5015435-5016292,5016352-5016657
Length = 387
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -3
Query: 291 SNDASPLPGPMIVERSPPDNNGFSGPPTREGSTPD 187
S + + LP PM++E PP ++ + G PD
Sbjct: 7 SPETAELPAPMVLEPPPPPSDEAAAEEEEAGVKPD 41
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 300 PKLSNDASPLPGPMIVERSPPDNNGFSGPPTREGSTP 190
PK S P P E+SPP + PP E S P
Sbjct: 771 PKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPP 807
>08_02_0934 + 22747742-22748644
Length = 300
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 200 PSRVGGPENPLLSGGDLSTIIGPGRGDAS 286
PS +GG E P++ GG ST P +S
Sbjct: 248 PSLLGGGEEPVVLGGAGSTSFSPSTSSSS 276
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 285 DASPLPGPMIVERSPPDNNGFSGPPTREGSTPDFS 181
+ +P P P V PP+ N + PP S P+ +
Sbjct: 477 EITPYPSPPEVVPGPPEINPYPSPPEIVPSPPEIT 511
>08_01_0892 -
8778097-8778236,8778390-8778486,8778568-8778747,
8779138-8779247,8781153-8781294,8782298-8782686,
8782752-8782834,8783524-8785244,8785894-8786040,
8786121-8786264,8786669-8786741,8787413-8787633
Length = 1148
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +2
Query: 5 EAIMASTSRMETNKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNE 184
E+ TS + K + + D + ED +C ECGLVV +W+ S +
Sbjct: 143 ESTHLDTSEVNNKKQLDNCNHDIHVYEDL---GHVCHECGLVVRKADSLFHYQWKKASRK 199
Query: 185 KSGVD 199
++ V+
Sbjct: 200 RTNVN 204
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 26.2 bits (55), Expect = 6.4
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
Frame = +2
Query: 110 CSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLL----SGGDLSTIIGPGRG 277
C E G G + E++ F NE G P V P+L SGG + G G G
Sbjct: 220 CGEPGHRHGTTGKKMDDEYQNFLNELGGSAPESVTKSSGPMLALTGSGGSGGSSGGVGAG 279
Query: 278 DAS 286
S
Sbjct: 280 SGS 282
>03_05_0675 + 26630466-26632070
Length = 534
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 35 ETNKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVG 214
+T + +CY H + D +AG+++ G V ++ D G + S S
Sbjct: 135 DTLRALCYLHEQGRIHRDIKAGNILVDSDGSV---KLADFGVSASIYETAPS--TSSAFS 189
Query: 215 GPEN--PLLSGGDLST 256
GP N P SG LS+
Sbjct: 190 GPINHAPPPSGAALSS 205
>02_04_0430 + 22834405-22834839
Length = 144
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 155 GSEWRTFSNEKSGVDPSRVGGPENPLLSGG 244
G+ WR + + SRVG P P LS G
Sbjct: 80 GAGWRPLCSSPTPASFSRVGSPLPPTLSSG 109
>01_06_0096 - 26408159-26408911,26409012-26409440
Length = 393
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 323 SCSGISIHQNCQMMHHPSLD 264
+CS I HQNC M P L+
Sbjct: 73 TCSYIQEHQNCMMYGRPDLE 92
>03_02_0348 +
7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -3
Query: 267 GPMIVERSPPDNNGFSGPPTREGSTPDFSLLNVLH 163
G + RSP N+ F P + PD++ N+ H
Sbjct: 328 GESRLRRSPAKNSSFHRPMSPMSPVPDYAFENLQH 362
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,226,606
Number of Sequences: 37544
Number of extensions: 222312
Number of successful extensions: 757
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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