Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N16
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   0.24 
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   0.24 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   0.73 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   2.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   3.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   6.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 155 GSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPG 271
           G+ W +  N  S +  S VG P++PL    D +++I PG
Sbjct: 26  GNTWLSLDN--SNMSMSSVG-PQSPLDMKPDTASLINPG 61


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +2

Query: 155 GSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPG 271
           G+ W +  N  S +  S VG P++PL    D +++I PG
Sbjct: 26  GNTWLSLDN--SNMSMSSVG-PQSPLDMKPDTASLINPG 61


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.4 bits (48), Expect = 0.73
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -3

Query: 303 TPKLSNDASPLPGPMIVERSPPDNNGFSGPPTR 205
           TP  SN  SP+P P  ++ + P       PP +
Sbjct: 436 TPPSSNPVSPVPSPDPLDLAIPVRETLILPPRK 468


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 176 SNEKSGVDPSRVGGPENPLLSG 241
           SNE S V    + GPE  +LSG
Sbjct: 268 SNEMSKVKVIDMTGPEQRILSG 289


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 12  SWRARREWRLT 44
           SW   R WR+T
Sbjct: 221 SWEQNRSWRIT 231


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 227 DSLVHQHERDQHQIF 183
           +SLVH + RDQ + +
Sbjct: 251 ESLVHLYTRDQSETY 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,298
Number of Sequences: 438
Number of extensions: 2508
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)