Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N15
         (365 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093824-1|AAH93824.1|  422|Homo sapiens serine/threonine/tyrosi...    31   1.1  
BC093822-1|AAH93822.1|  422|Homo sapiens serine/threonine/tyrosi...    31   1.1  
AY563054-1|AAT01226.1|  422|Homo sapiens tyrosine kinase protein...    31   1.1  
AF251059-1|AAK34949.1|  422|Homo sapiens kinase domain protein p...    31   1.1  
AK093431-1|BAC04161.1|  283|Homo sapiens protein ( Homo sapiens ...    30   2.0  
AK126873-1|BAC86732.1|  605|Homo sapiens protein ( Homo sapiens ...    29   3.5  
BX538208-1|CAD98068.1|  231|Homo sapiens hypothetical protein pr...    29   4.6  

>BC093824-1|AAH93824.1|  422|Homo sapiens serine/threonine/tyrosine
           kinase 1 protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 204 WREAPVPMPTEAALAQRLESELRAAKGASELATAEVLVPAELLARASMQTLAL 362
           WREA  P P E  L  RLE+ ++ A   + L   E++VP    A A ++  +L
Sbjct: 365 WREADRPSPRE--LRLRLEAAIKTADDEAVLQVPELVVPELYAAVAGIRVESL 415


>BC093822-1|AAH93822.1|  422|Homo sapiens serine/threonine/tyrosine
           kinase 1 protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 204 WREAPVPMPTEAALAQRLESELRAAKGASELATAEVLVPAELLARASMQTLAL 362
           WREA  P P E  L  RLE+ ++ A   + L   E++VP    A A ++  +L
Sbjct: 365 WREADRPSPRE--LRLRLEAAIKTADDEAVLQVPELVVPELYAAVAGIRVESL 415


>AY563054-1|AAT01226.1|  422|Homo sapiens tyrosine kinase protein
           protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 204 WREAPVPMPTEAALAQRLESELRAAKGASELATAEVLVPAELLARASMQTLAL 362
           WREA  P P E  L  RLE+ ++ A   + L   E++VP    A A ++  +L
Sbjct: 365 WREADRPSPRE--LRLRLEAAIKTADDEAVLQVPELVVPELYAAVAGIRVESL 415


>AF251059-1|AAK34949.1|  422|Homo sapiens kinase domain protein
           protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +3

Query: 204 WREAPVPMPTEAALAQRLESELRAAKGASELATAEVLVPAELLARASMQTLAL 362
           WREA  P P E  L  RLE+ ++ A   + L   E++VP    A A ++  +L
Sbjct: 365 WREADRPSPRE--LRLRLEAAIKTADDEAVLQVPELVVPELYAAVAGIRVESL 415


>AK093431-1|BAC04161.1|  283|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36112 fis, clone TESTI2022023, weakly similar to
           Bos taurus Reissner's fiber glycoprotein I mRNA. ).
          Length = 283

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +3

Query: 132 MEILPVTNQFNVGFTSEKAWNGPTWREAPVPMPTEAALAQRLESELRAAK 281
           ME LP   Q+ V  T E+   GP WR  P  M +    A    +++RAA+
Sbjct: 9   MEPLPGALQWGVQATLERG-RGPLWRRLPGAMGSRQKAATEGPAQVRAAR 57


>AK126873-1|BAC86732.1|  605|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44925 fis, clone BRAMY3014613, highly  similar
           to Homo sapiens SH3-domain binding protein 1 (SH3BP1).
           ).
          Length = 605

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +3

Query: 198 PTWREAPVPMPTEAALAQRLESEL--RAAKGASELATAEVLVPAELLARASMQTLALA 365
           P    AP P    AA  +R ESE+  R A      +  E   P E +AR S  +LA A
Sbjct: 451 PAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARRSTGSLAAA 508


>BX538208-1|CAD98068.1|  231|Homo sapiens hypothetical protein
           protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = +3

Query: 144 PVTNQFNVGFTSEKAWNG---PTWREAPV 221
           P T+ F VG  SE +  G   PTW+E P+
Sbjct: 170 PTTSGFTVGTLSETSTGGPATPTWKECPI 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,759,650
Number of Sequences: 237096
Number of extensions: 903328
Number of successful extensions: 2119
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)