Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N13
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr...    29   5.6  
BC150196-1|AAI50197.1|  726|Homo sapiens Unknown (protein for IM...    29   5.6  
BC139918-1|AAI39919.1|  726|Homo sapiens MAP1B protein protein.        29   5.6  
BC094834-1|AAH94834.1|  727|Homo sapiens MAP1B protein protein.        29   5.6  
BC141853-1|AAI41854.1|  571|Homo sapiens MAP1B protein protein.        28   9.8  

>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated
           protein 1B protein.
          Length = 2468

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/69 (31%), Positives = 28/69 (40%)
 Frame = +1

Query: 145 PKLLIIITLKMEEQTIPELSPFDPTKEIKTYLKCHKKTSKTSEGGIKTDEVKTQERKESH 324
           PK     T+K E +  PE    +  K  K   K   KT    E   K +EVK + +KE  
Sbjct: 630 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 689

Query: 325 KLSSKNAVK 351
           K   K   K
Sbjct: 690 KEEKKEPKK 698


>BC150196-1|AAI50197.1|  726|Homo sapiens Unknown (protein for
           IMAGE:40148774) protein.
          Length = 726

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/69 (31%), Positives = 28/69 (40%)
 Frame = +1

Query: 145 PKLLIIITLKMEEQTIPELSPFDPTKEIKTYLKCHKKTSKTSEGGIKTDEVKTQERKESH 324
           PK     T+K E +  PE    +  K  K   K   KT    E   K +EVK + +KE  
Sbjct: 630 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 689

Query: 325 KLSSKNAVK 351
           K   K   K
Sbjct: 690 KEEKKEPKK 698


>BC139918-1|AAI39919.1|  726|Homo sapiens MAP1B protein protein.
          Length = 726

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/69 (31%), Positives = 28/69 (40%)
 Frame = +1

Query: 145 PKLLIIITLKMEEQTIPELSPFDPTKEIKTYLKCHKKTSKTSEGGIKTDEVKTQERKESH 324
           PK     T+K E +  PE    +  K  K   K   KT    E   K +EVK + +KE  
Sbjct: 630 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 689

Query: 325 KLSSKNAVK 351
           K   K   K
Sbjct: 690 KEEKKEPKK 698


>BC094834-1|AAH94834.1|  727|Homo sapiens MAP1B protein protein.
          Length = 727

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 22/69 (31%), Positives = 28/69 (40%)
 Frame = +1

Query: 145 PKLLIIITLKMEEQTIPELSPFDPTKEIKTYLKCHKKTSKTSEGGIKTDEVKTQERKESH 324
           PK     T+K E +  PE    +  K  K   K   KT    E   K +EVK + +KE  
Sbjct: 630 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 689

Query: 325 KLSSKNAVK 351
           K   K   K
Sbjct: 690 KEEKKEPKK 698


>BC141853-1|AAI41854.1|  571|Homo sapiens MAP1B protein protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/65 (32%), Positives = 27/65 (41%)
 Frame = +1

Query: 145 PKLLIIITLKMEEQTIPELSPFDPTKEIKTYLKCHKKTSKTSEGGIKTDEVKTQERKESH 324
           PK     T+K E +  PE    +  K  K   K   KT    E   K +EVK + +KE  
Sbjct: 504 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 563

Query: 325 KLSSK 339
           K   K
Sbjct: 564 KEEKK 568


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,515,213
Number of Sequences: 237096
Number of extensions: 755370
Number of successful extensions: 1336
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)