Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N12
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 119 9e-28
10_08_0620 - 19321612-19323237 118 2e-27
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 37 0.008
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 33 0.077
01_05_0699 - 24376987-24377154,24377259-24377406,24377530-243776... 31 0.31
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 31 0.41
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 29 1.3
02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072 29 1.3
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 29 2.2
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 29 2.2
06_01_1053 - 8328902-8329156,8330538-8330804,8330895-8332343,833... 29 2.2
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 28 3.8
03_02_0340 + 7635354-7635621,7635992-7636121,7636865-7636929,763... 27 5.1
09_04_0093 - 14550806-14552452 27 6.7
06_03_0079 - 16301056-16301611,16301745-16301906,16306776-163071... 27 6.7
11_06_0545 + 24839536-24843421,24843871-24844310 27 8.8
09_03_0029 + 11724581-11724583,11726413-11726610,11726874-117270... 27 8.8
08_02_0811 + 21438848-21439001,21439469-21439662,21439769-214398... 27 8.8
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 119 bits (287), Expect = 9e-28
Identities = 52/79 (65%), Positives = 70/79 (88%)
Frame = +3
Query: 204 GPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERLYILNIVKQIRKAGCN 383
GP R+E AK+ +IQF +SPPKTD++ +VIVSDYA MDR+L+EER YIL +VK+I+ +GCN
Sbjct: 233 GPTRVENAKIAVIQFQVSPPKTDIEQSVIVSDYAQMDRILREERNYILGMVKKIKASGCN 292
Query: 384 VLLVQKSILRDALSDLAIH 440
VLL+QKSILRDA++DL++H
Sbjct: 293 VLLIQKSILRDAVTDLSLH 311
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +1
Query: 103 DLRDVKVIERIGGTVEDTELIPGLVIAHRASN 198
DLRD++V++++GGTV+DTELI GL+ +AS+
Sbjct: 198 DLRDIRVVKKLGGTVDDTELIRGLIFDKKASH 229
>10_08_0620 - 19321612-19323237
Length = 541
Score = 118 bits (284), Expect = 2e-27
Identities = 51/79 (64%), Positives = 70/79 (88%)
Frame = +3
Query: 204 GPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERLYILNIVKQIRKAGCN 383
GP RI AK+ +IQF +SPPKTD++H+V+VSDYA MDR+L+EER YIL +VK+I+ +GCN
Sbjct: 237 GPTRIGDAKIAVIQFQVSPPKTDIEHSVVVSDYAQMDRILREERNYILGMVKKIKASGCN 296
Query: 384 VLLVQKSILRDALSDLAIH 440
VLL+QKSILRD+++DL++H
Sbjct: 297 VLLIQKSILRDSVTDLSLH 315
Score = 45.2 bits (102), Expect = 2e-05
Identities = 19/33 (57%), Positives = 29/33 (87%)
Frame = +1
Query: 103 DLRDVKVIERIGGTVEDTELIPGLVIAHRASNV 201
DLRD++V++++G TV+DTELI GLV+ +AS+V
Sbjct: 202 DLRDIRVVKKLGCTVDDTELIRGLVLNKKASHV 234
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 207 PHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERLYILNIVKQIRKAGCNV 386
P RIE AK+ ++ PPK H V + + ++E+ Y +V++ + G +
Sbjct: 236 PKRIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQMLREQEQKYFDEMVQKCKDVGATL 295
Query: 387 LLVQ 398
++ Q
Sbjct: 296 VICQ 299
Score = 29.9 bits (64), Expect = 0.95
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 115 VKVIERIGGTVEDTELIPGLVIAHRASNVMDLTALRKLKLDLFSSVFHHRK 267
+KV ++GG +EDTEL+ G+++ S+ + K+ + + F K
Sbjct: 205 IKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRIEDAKIAILTCPFEPPK 255
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 33.5 bits (73), Expect = 0.077
Identities = 14/45 (31%), Positives = 30/45 (66%)
Frame = +3
Query: 273 MDHNVIVSDYAAMDRVLKEERLYILNIVKQIRKAGCNVLLVQKSI 407
+++ + + A++D +L++E+ ++ IV +I NVLLV+KS+
Sbjct: 362 LEYQKVTNKLASIDTILEQEKEHLRAIVAKIESRRPNVLLVEKSV 406
>01_05_0699 -
24376987-24377154,24377259-24377406,24377530-24377645,
24377743-24377925,24377998-24378186,24378273-24378497,
24378514-24378759,24378836-24378983,24379126-24379241,
24379441-24379497,24379735-24379923,24380001-24380150,
24380323-24380404,24380484-24380601,24380713-24380899,
24381044-24381138,24381223-24381277,24381376-24381567,
24381657-24381853,24382534-24382684
Length = 1003
Score = 31.5 bits (68), Expect = 0.31
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = -2
Query: 221 LNAVRSMTLDARCAITSPGISSVSS 147
+++V + TLD +C +T PG+SS++S
Sbjct: 859 VDSVSNRTLDQQCTVTRPGLSSITS 883
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 31.1 bits (67), Expect = 0.41
Identities = 16/76 (21%), Positives = 35/76 (46%)
Frame = +3
Query: 213 RIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEERLYILNIVKQIRKAGCNVLL 392
R+EKAK+ + + T+ V++ ++ K E + ++K + +G V+
Sbjct: 231 RVEKAKIAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVADSGAKVI- 289
Query: 393 VQKSILRDALSDLAIH 440
+ A+ D+A+H
Sbjct: 290 ----VSGAAVGDMALH 301
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +3
Query: 273 MDHNVIVSDYAAMDRVLKEERLYILNIVKQIRKAGCNVLLVQKSI 407
+++ + + A++ +L++E+ ++ IV +I NVLLV+KS+
Sbjct: 379 LEYQKVSNKLASIGTILEQEKEHLRMIVGKIESRRPNVLLVEKSV 423
>02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072
Length = 735
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +1
Query: 1 NSARGCISLLPFGPIAVQAIDCDGTNCRRCGSKSDL 108
N GCISL P+AV A C G C + S L
Sbjct: 140 NYVTGCISLCRSSPLAVSAGACAGVGCCQSSIPSGL 175
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 204 GPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDR 317
GP IEKAK ++F P+ +D N+ +S D+
Sbjct: 1450 GPESIEKAKPVPVKFKCGAPEKSLDRNMSISASLVSDK 1487
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 223 KLKLDLFSSVFHHRKLIWITM*LFPTMLQWIVY*KRN 333
+L+ D FSSV W+ LFP ML ++VY K++
Sbjct: 343 RLRFD-FSSVIGPLFFEWVVALLFPVMLTYLVYEKQH 378
>06_01_1053 -
8328902-8329156,8330538-8330804,8330895-8332343,
8332461-8332619,8333246-8333372,8333444-8333775,
8333859-8334593,8334735-8335073,8335160-8335313,
8335405-8336154,8336242-8336372
Length = 1565
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +3
Query: 273 MDHNVIVSDYAAMDRVLKEERLYILNIVKQIRKAGCNVLLVQKSI 407
++H + A+++ +L++E+ Y+ V +I +VLLV+KS+
Sbjct: 327 LEHQKASNKLASINSILEQEKEYLKIAVAKIEAQRPHVLLVEKSV 371
>02_05_0232 +
27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 291 VSDYAAMDRVLKEERLYILNIVKQIRKAGCNVLLVQKSILRDALSDL-AIH 440
V+DY +R EE+L ++ + K C L++++ + L+DL A+H
Sbjct: 113 VNDYRNKEREKAEEKLDEYLLICRKLKVSCEKLIIEEDDIAKGLTDLVALH 163
>03_02_0340 +
7635354-7635621,7635992-7636121,7636865-7636929,
7637255-7637529,7640204-7640441,7641095-7641228,
7641340-7641414,7641675-7641776,7642154-7642263,
7642334-7642430
Length = 497
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 20 SHFYHLVPLLYKLSTVMEPIVGGVGARVIFV 112
+++YH+ P++Y ST+ EP R +FV
Sbjct: 98 NYWYHVWPVMYNSSTITEPQYYQHAQRYLFV 128
>09_04_0093 - 14550806-14552452
Length = 548
Score = 27.1 bits (57), Expect = 6.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 85 RCGSKSDLRDVKVIERIGGTVEDTELIPGLVIAHRASNVMDL 210
+CG+ D + ++ TV T +I GL I RA +DL
Sbjct: 340 KCGAVEDAHRLFLVMPRRSTVSWTTMISGLAIHGRAEEALDL 381
>06_03_0079 -
16301056-16301611,16301745-16301906,16306776-16307134,
16307372-16307884
Length = 529
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +3
Query: 201 HGPHRIEKAKVGLIQFCISPPKTDMDHNVIVSDYAAMDRVLKEE 332
HG H +E K L C ++ + +DY A+++ L+++
Sbjct: 401 HGSHSMESEKTALSHACSGDLLVGLEFSAQKADYNALEKDLRDK 444
>11_06_0545 + 24839536-24843421,24843871-24844310
Length = 1441
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 404 GFLHQEHITT-SF-SNLFNNIQDI*TFLF*YT 315
GFLH H TT SF + L +N D FL YT
Sbjct: 212 GFLHMPHFTTESFLTELMSNKADATAFLLEYT 243
>09_03_0029 +
11724581-11724583,11726413-11726610,11726874-11727038,
11727217-11727283,11727645-11727812,11728070-11728194,
11728288-11728446,11728552-11728714,11728795-11728920,
11729000-11729083,11729161-11729528,11729613-11729813,
11729909-11730018,11730113-11730197,11730360-11730488,
11730580-11730667,11730805-11730893,11730968-11731267
Length = 875
Score = 26.6 bits (56), Expect = 8.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 223 KLKLDLFSSVFHHRKLIWITM*LFPTMLQWIVY*K 327
+ +LDL SS+ WI LFP ML ++VY K
Sbjct: 272 RFRLDL-SSLLSVLFFTWIVELLFPVMLTYLVYEK 305
>08_02_0811 +
21438848-21439001,21439469-21439662,21439769-21439897,
21441552-21441671,21441751-21441887,21441969-21442124,
21442565-21442943,21443041-21443157,21443225-21443371
Length = 510
Score = 26.6 bits (56), Expect = 8.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 216 IEKAKVGLIQFCISPPKTDMDHNVIVSDYAA 308
+EK K L + + PP+ D D +V++ +A
Sbjct: 318 VEKVKAKLAKLTVGPPEADSDITPVVTESSA 348
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,476,583
Number of Sequences: 37544
Number of extensions: 238174
Number of successful extensions: 600
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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