Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N12
(441 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 25 0.28
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 24 0.85
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 1.5
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 3.4
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 6.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.9
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.9
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.9
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.9
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 7.9
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 7.9
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 25.4 bits (53), Expect = 0.28
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 394 TKSTLQPAFLICLTIFKIYRRSSFNTRSI 308
T S P F++ T +KIYR + T+S+
Sbjct: 212 TISFYLPLFVMVFTYYKIYRAAVIQTKSL 240
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.8 bits (49), Expect = 0.85
Identities = 10/43 (23%), Positives = 23/43 (53%)
Frame = +2
Query: 8 HEVVSHFYHLVPLLYKLSTVMEPIVGGVGARVIFVTLKLLNVL 136
H++ + ++ L L+++L T P GG + + LK ++ +
Sbjct: 542 HDISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILKGIDAI 584
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 23.0 bits (47), Expect = 1.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 400 FCTKSTLQPAFLICLTIFKIYRRS 329
+C K T P L + FK+ R S
Sbjct: 90 YCPKGTKNPGTLATVNAFKLLRNS 113
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 3.4
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 103 DLRDVKVIERIGGTVEDTELIPGLVIAHRASNVMDL 210
D+ D K ++ I GT++D E + ++DL
Sbjct: 83 DISDFKDVDPIFGTIKDLEDLTAEAKKQNLKVILDL 118
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.0 bits (42), Expect = 6.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 55 AIDCDGTNCRRCGSKSDLRDVKVIERIGGT 144
+I DG + CG ++V V+ER T
Sbjct: 107 SIGVDGCDLMCCGRGYKTQEVTVVERCACT 136
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.6 bits (41), Expect = 7.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 71 PSQSIACTAMGPN 33
P++ + CT GPN
Sbjct: 421 PNEIVTCTNCGPN 433
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.6 bits (41), Expect = 7.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 71 PSQSIACTAMGPN 33
P++ + CT GPN
Sbjct: 407 PNEIVTCTNCGPN 419
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.6 bits (41), Expect = 7.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 71 PSQSIACTAMGPN 33
P++ + CT GPN
Sbjct: 441 PNEIVTCTNCGPN 453
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.6 bits (41), Expect = 7.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -2
Query: 71 PSQSIACTAMGPN 33
P++ + CT GPN
Sbjct: 390 PNEIVTCTNCGPN 402
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 20.6 bits (41), Expect = 7.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +2
Query: 44 LLYKLSTVMEPIVGGVGARVIFVTLKLLNVLVVQWKIQ 157
LL + ++ P+V A + + LKL ++ V K Q
Sbjct: 32 LLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQ 69
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 20.6 bits (41), Expect = 7.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 55 AIDCDGTNCRRCGSKSDLRDVKVIER 132
+I DG + CG ++V V+ER
Sbjct: 108 SIGVDGCDLMCCGRGYKTQEVTVVER 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,465
Number of Sequences: 438
Number of extensions: 2647
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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