Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N11
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 36 0.011
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 36 0.011
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 36 0.011
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 36 0.011
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.30
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.30
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.30
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 0.40
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 0.52
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 30 0.52
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 30 0.52
U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific ... 29 0.91
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 28 1.6
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 1.6
AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical ... 28 1.6
AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical ... 28 2.1
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 27 2.8
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 27 3.7
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 27 3.7
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 27 4.9
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 26 6.4
U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical pr... 26 6.4
U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical pr... 26 6.4
U28738-14|AAA68316.2| 129|Caenorhabditis elegans Hypothetical p... 26 8.5
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 26 8.5
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 35.5 bits (78), Expect = 0.011
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN-------GKENGTXXXXXXXXXXXXN 255
EK ++P + T EVKE KSPTKK + PE KE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETT 1503
Query: 256 GDAEESNDATENGDVTEVKETGVKRKST 339
+ E+ TE +E T VK++ T
Sbjct: 1504 IEKTETTMTTEMTHESEESRTSVKKEKT 1531
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.91
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 100 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 207
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 198
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 213
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 210
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 35.5 bits (78), Expect = 0.011
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN-------GKENGTXXXXXXXXXXXXN 255
EK ++P + T EVKE KSPTKK + PE KE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETT 1503
Query: 256 GDAEESNDATENGDVTEVKETGVKRKST 339
+ E+ TE +E T VK++ T
Sbjct: 1504 IEKTETTMTTEMTHESEESRTSVKKEKT 1531
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.91
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 100 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 207
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 198
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 213
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 210
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 35.5 bits (78), Expect = 0.011
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN-------GKENGTXXXXXXXXXXXXN 255
EK ++P + T EVKE KSPTKK + PE KE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETT 1503
Query: 256 GDAEESNDATENGDVTEVKETGVKRKST 339
+ E+ TE +E T VK++ T
Sbjct: 1504 IEKTETTMTTEMTHESEESRTSVKKEKT 1531
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.91
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 100 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 207
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 198
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 213
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 210
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 35.5 bits (78), Expect = 0.011
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN-------GKENGTXXXXXXXXXXXXN 255
EK ++P + T EVKE KSPTKK + PE KE
Sbjct: 1444 EKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPEDVKSPVKKEKSPDATNIVEVSSETT 1503
Query: 256 GDAEESNDATENGDVTEVKETGVKRKST 339
+ E+ TE +E T VK++ T
Sbjct: 1504 IEKTETTMTTEMTHESEESRTSVKKEKT 1531
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
A+ K++ +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1702 ASPTKKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 29.1 bits (62), Expect = 0.91
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +1
Query: 100 KQDAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 207
K+D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESN 198
A+ K++ +PE+ S K KSPTKK + PE +
Sbjct: 1575 ASPTKKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTEVKESPIK-KSPTKKTEVPESNGKENG 213
VE++ A+P + T K + + KSPTKK + P S K+ G
Sbjct: 1801 VEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTG 1841
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 207
+ A EK + ++ S E + KSPTKK + PE + +E
Sbjct: 1728 EKAEEKPKSPTKKEKSPEKSAAEEVKSPTKKEKSPEKSAEE 1768
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 210
+ +V ++ +P+E + + + P KSPTKK + PE + E+
Sbjct: 1609 EKSVVEELKSPKEKSPEKADDKP--KSPTKKEKSPEKSATED 1648
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK + + ++ S E V+E P KK KKTE +S+ + + ++
Sbjct: 9493 LEKDEKSNKDSGSNETVEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQK 9552
Query: 271 SNDATENGDVTEVKE 315
DAT T+ K+
Sbjct: 9553 VADATSKQKETDKKQ 9567
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK D + ++ S E V E P KK KKTE +S+ + + ++
Sbjct: 9743 LEKDDKSTKDSESKETVDEKPKKKVLKKKTEKSDSSISQKSVTSKTVVESGGPSESETQK 9802
Query: 271 SNDATENGDVTEVKE 315
DA T+ K+
Sbjct: 9803 VADAARKQKETDEKQ 9817
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 276
E + EE V E P KK KKTE +S+ + + + ++ +
Sbjct: 9966 ETKSKKTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVS 10025
Query: 277 DATENGDVTEVKETGVKRK 333
+A + + KE+ K+K
Sbjct: 10026 EADK---AHKQKESDEKQK 10041
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK + + ++ S E V+E P KK KKTE +S+ + + ++
Sbjct: 9513 LEKDEKSNKDSGSNETVEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQK 9572
Query: 271 SNDATENGDVTEVKE 315
DAT T+ K+
Sbjct: 9573 VADATSKQKETDKKQ 9587
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK D + ++ S E V E P KK KKTE +S+ + + ++
Sbjct: 9763 LEKDDKSTKDSESKETVDEKPKKKVLKKKTEKSDSSISQKSVTSKTVVESGGPSESETQK 9822
Query: 271 SNDATENGDVTEVKE 315
DA T+ K+
Sbjct: 9823 VADAARKQKETDEKQ 9837
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK + + +E S E V E P KK KKTE +S+ + + ++
Sbjct: 13396 LEKDEKSTKESESKETVDEKPKKKVLKKKTEKSDSSISQKSETSKTVVESAGPSESETQK 13455
Query: 271 SNDATENGDVTEVKE 315
DA T+ K+
Sbjct: 13456 VADAARKQKETDEKQ 13470
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 276
E + EE V E P KK KKTE +S+ + + + ++ +
Sbjct: 9986 ETKSKKTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVS 10045
Query: 277 DATENGDVTEVKETGVKRK 333
+A + + KE+ K+K
Sbjct: 10046 EADK---AHKQKESDEKQK 10061
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK + + ++ S E V+E P KK KKTE +S+ + + ++
Sbjct: 9513 LEKDEKSNKDSGSNETVEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQK 9572
Query: 271 SNDATENGDVTEVKE 315
DAT T+ K+
Sbjct: 9573 VADATSKQKETDKKQ 9587
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK D + ++ S E V E P KK KKTE +S+ + + ++
Sbjct: 9763 LEKDDKSTKDSESKETVDEKPKKKVLKKKTEKSDSSISQKSVTSKTVVESGGPSESETQK 9822
Query: 271 SNDATENGDVTEVKE 315
DA T+ K+
Sbjct: 9823 VADAARKQKETDEKQ 9837
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +1
Query: 94 VEKQDAAPEEVTSTE-VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEE 270
+EK + + +E S E V E P KK KKTE +S+ + + ++
Sbjct: 13396 LEKDEKSTKESESKETVDEKPKKKVLKKKTEKSDSSISQKSETSKTVVESAGPSESETQK 13455
Query: 271 SNDATENGDVTEVKE 315
DA T+ K+
Sbjct: 13456 VADAARKQKETDEKQ 13470
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/79 (22%), Positives = 32/79 (40%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 276
E + EE V E P KK KKTE +S+ + + + ++ +
Sbjct: 9986 ETKSKKTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVS 10045
Query: 277 DATENGDVTEVKETGVKRK 333
+A + + KE+ K+K
Sbjct: 10046 EADK---AHKQKESDEKQK 10061
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 216
A VE ++ + E EV+ESPIKK T + +S K T
Sbjct: 459 AKVESEEPSDNEEEEEEVEESPIKKDKTPRKYSRKSAAKVEST 501
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/52 (23%), Positives = 22/52 (42%)
Frame = +1
Query: 118 EEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 273
EE + E +E +++SP KK + P +++ + EES
Sbjct: 464 EEPSDNEEEEEEVEESPIKKDKTPRKYSRKSAAKVESTESSGNEEEEEVEES 515
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 142 KESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDA-TENGDVTEVKET 318
+E +++SP KK + P + K++ AEE+N + TE+ ++ E+
Sbjct: 609 EEEEVEESPKKKGKTPRKSSKKSAAKEESEESSDDEEEEQAEETNGSHTESPTKSKTDES 668
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 0.52
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 118 EEVTSTEVKESPIKKSPTKKTEVPESNG-KENGTXXXXXXXXXXXXNGDAEESNDATENG 294
E + ++ + P ++ E PE N E+ + +++S+DA+EN
Sbjct: 6 ESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEKAADSPESSSDQSDDSDDASENS 65
Query: 295 DVTEVKETGVKRKS 336
+E E K+K+
Sbjct: 66 SSSEPDEPAPKKKN 79
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 210
D E + P E T+ +VK+ K+SP KK +S GKEN
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 85 DAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 210
D E + P E T+ +VK+ K+SP KK +S GKEN
Sbjct: 112 DPETETKKKDPSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>U88165-7|AAK21397.1| 231|Caenorhabditis elegans Sperm specific
transcript protein20 protein.
Length = 231
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 79 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGK 204
M+D K AA + +S+ +K IKKSPT+K+E + + K
Sbjct: 156 MSDIEKSKSRAASKSNSSSSIKS--IKKSPTEKSENTDRSSK 195
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKT 180
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKT 180
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKT 180
E+ D +EVT T + E P+KK+ ++T
Sbjct: 40 EEVDVVMDEVTETIISEEPVKKNKHQRT 67
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 210
EK+D E+ +S KKS KKTE +S+ K+N
Sbjct: 268 EKKDDKKEDDKEKSATKSEDKKSDEKKTEEKKSDEKKN 305
>AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical
protein Y38E10A.7 protein.
Length = 286
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +1
Query: 163 SPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKETGVK 327
SPT +T V +G N NG +EE+ AT GD T VK
Sbjct: 60 SPTTRTPVILVHGTTNSAGTFAPQAAYFRANGWSEETVYATTYGDAGVTTATNVK 114
>AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical
protein ZK484.3 protein.
Length = 332
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 109 AAPEEVTSTEVKESPIKKS-PTKKTEVPESNGKENGT 216
AA T T +K++PIKKS P+ +E + K+ G+
Sbjct: 119 AAAAAATLTSMKKAPIKKSVPSTSSEADSTTPKKKGS 155
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 27.5 bits (58), Expect = 2.8
Identities = 25/87 (28%), Positives = 32/87 (36%)
Frame = +1
Query: 88 AAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAE 267
+A K D + +E EVKE KKS +K T+ S+ E E
Sbjct: 192 SAKSKDDDSSDEEEEEEVKEKSPKKS-SKSTKRAASDDDEEEEPVATKKSKKSKRAETPE 250
Query: 268 ESNDATENGDVTEVKETGVKRKSTVVE 348
E +D E T K KR T E
Sbjct: 251 EEDDEEEEVVKTPKKTKKSKRAETPEE 277
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKT--EVPESNGKEN 210
+ Q P+ + E E+PIKK P + EV E N +E+
Sbjct: 25 QHQQTQPQPLPEEEQPENPIKKDPKPEVLEEVVEKNREED 64
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKT--EVPESNGKEN 210
+ Q P+ + E E+PIKK P + EV E N +E+
Sbjct: 25 QHQQTQPQPLPEEEQPENPIKKDPKPEVLEEVVEKNREED 64
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 82 ADAAVEKQDAAPEEVTSTEVKESPIKKSPTK 174
A+ EK++ P+EVT + KE +K+ TK
Sbjct: 96 AEKEEEKEEKPPKEVTEEKEKEKEREKTKTK 126
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 121 EVTSTEVKESPIKKSPTKKTEVPESNGKENGT 216
E T+T V+E +K SP+ T+ +G +GT
Sbjct: 82 EPTTTPVEEEKVKVSPSSSTKEYPDDGGYDGT 113
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 139 VKESPIKKSPTKKTEVPESNGKENG 213
VK SP+ KSP K + + + K+ G
Sbjct: 687 VKSSPVNKSPVKSSPIKKEAEKKKG 711
>U70846-2|ABI18146.1| 647|Caenorhabditis elegans Hypothetical
protein D1073.1b protein.
Length = 647
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 124 VTSTEVKESPIKKSPTKKTEVPESNGKENG 213
V T P+ S + +VP NGK NG
Sbjct: 580 VAETSFTTDPLNSSEIEVNDVPTENGKVNG 609
>U70846-1|AAB09104.4| 510|Caenorhabditis elegans Hypothetical
protein D1073.1a protein.
Length = 510
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 124 VTSTEVKESPIKKSPTKKTEVPESNGKENG 213
V T P+ S + +VP NGK NG
Sbjct: 443 VAETSFTTDPLNSSEIEVNDVPTENGKVNG 472
>U28738-14|AAA68316.2| 129|Caenorhabditis elegans Hypothetical
protein T28D9.1 protein.
Length = 129
Score = 25.8 bits (54), Expect = 8.5
Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 4/94 (4%)
Frame = +1
Query: 79 MADAAVEKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENG--TXXXXXXXXXXXX 252
M+D A PE V E E P + + E ++NG T
Sbjct: 1 MSDVAETVVAQEPEVVEPVE--EKPTETGSDDVVVIDEKTSEQNGEKTEETQAEATEEKN 58
Query: 253 NGDAEESND--ATENGDVTEVKETGVKRKSTVVE 348
+AEE++ A ENG+ + KR S+ E
Sbjct: 59 ETEAEEADKDKAVENGEAKDTNGNDRKRVSSAHE 92
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/70 (21%), Positives = 25/70 (35%)
Frame = +1
Query: 97 EKQDAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESN 276
++ D EE + +E + ++ E P +EN G E N
Sbjct: 3824 DETDKEDEEAIEGDGEEDQNEDQNDQELEDPTQTNEENEDSEEQKKEDEALEQGTGGEKN 3883
Query: 277 DATENGDVTE 306
D +N DV +
Sbjct: 3884 DQDDNKDVAD 3893
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.295 0.115 0.295
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,659,949
Number of Sequences: 27780
Number of extensions: 83176
Number of successful extensions: 299
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 290
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (21.8 bits)
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