Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N09
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |S... 222 3e-59
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 214 6e-57
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 29 0.34
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 27 1.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 1.4
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 26 4.2
SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 4.2
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 25 5.6
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 5.6
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 25 5.6
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 5.6
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 25 7.4
SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces... 25 7.4
SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomy... 25 9.8
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 25 9.8
SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces pomb... 25 9.8
SPCC736.02 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 25 9.8
>SPCC188.02 |par1||protein phosphatase regulatory subunit Par1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 548
Score = 222 bits (542), Expect = 3e-59
Identities = 103/179 (57%), Positives = 137/179 (76%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLEILGSIINGFALPLK EHK F LY+ Q+AY +VQF+EKD+++T
Sbjct: 302 ELLEILGSIINGFALPLKEEHKIFLSRVLIPLHKAKSLPLYYPQIAYGIVQFVEKDSSVT 361
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
E VV GLL++WPK S KEV+FL EIE+I++V+EP++F KIQ PLF ++A +SS +FQV
Sbjct: 362 EEVVLGLLRYWPKVNSSKEVLFLNEIEDIIEVMEPSEFLKIQVPLFHKLATSISSQNFQV 421
Query: 370 AERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFMEMN 546
AERALYF+NN+Y + L+EEN +I+PI++PAL+ ISK HWN+ I ++ NVLK FM++N
Sbjct: 422 AERALYFFNNDYFVHLVEENVDIILPIIYPALFEISKSHWNRVIHSMVCNVLKLFMDIN 480
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 214 bits (523), Expect = 6e-57
Identities = 95/180 (52%), Positives = 132/180 (73%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLEILGSIINGFA+PLK EHK F LYH QL YC+VQF++KD +LT
Sbjct: 403 ELLEILGSIINGFAVPLKEEHKIFLSKVLIPLHQTKSVFLYHPQLTYCIVQFIDKDPSLT 462
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
+ V+ G+LK+WP+ S KE++FL EIE+I +V+EP++F I PLF+Q+A+ +SS HFQV
Sbjct: 463 KAVLTGILKYWPRINSFKELLFLNEIEDIFEVLEPSEFVNIMSPLFQQLARSISSMHFQV 522
Query: 370 AERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFMEMNS 549
AERAL W+NEY SL+ +N ++PI++P+LY+ + EHWN TI A+ NVL+ F++M++
Sbjct: 523 AERALCLWSNEYFTSLVSQNVVTLLPIIYPSLYKTANEHWNSTIQAIACNVLQIFVDMDA 582
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 391 WNNEYIMSLMEENNQVIMPIMFPALYRISK 480
W +E IMS M EN MP+ Y I K
Sbjct: 103 WTDEKIMSFMNENYSWFMPVFHSYPYNIQK 132
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 375 LSHLEVWTGYALSYLPEQWLLYFSKLCWL 289
L+ +E W+ L Y+P WLL L WL
Sbjct: 97 LNVIEYWSQLILYYVPVYWLLKAIFLIWL 125
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 184 AWHPSQETAPRNRPAERGTAINTSPYE 104
A+ + PR +P+ GTAI PYE
Sbjct: 207 AYEERPPSLPRRKPSRPGTAITLPPYE 233
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 142 LAYCVVQFLEKDATLTEPVVRGLLKFWP 225
L YC VQF+E + L R L KF+P
Sbjct: 171 LYYCFVQFMEVKSALIS-YDRSLFKFYP 197
>SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 277 LDVIEPAQFAK--IQEPLFRQIAKCVSSPHFQVAERA 381
L +I A + K I EPLF I C++S V+E A
Sbjct: 115 LHLIRRANWEKKEIGEPLFEAIMACINSRSIAVSEEA 151
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 25.4 bits (53), Expect = 5.6
Identities = 19/99 (19%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +1
Query: 253 FLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEEN- 429
FL I E+++ + A Q P+ ++ C++ F + E+ + F N ++ L++ N
Sbjct: 752 FLELIRELVEFSKEETMATSQSPIRTLLSACINLRPFLLQEQYISF-NMDFAEFLIDTNA 810
Query: 430 -------NQVIMPIMFPALYRISKEHWNQTIVALRYNVL 525
N ++ ++ + +E++N +A ++ +L
Sbjct: 811 SIKGSVVNTCVLDFLYKSFSDKVQENYNLIRIAAKFMLL 849
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 426 KQSSDNAYNVPRSVPDQQRALEPNHRGSTLQRAQRLHG 539
KQ SD + S+P QQ + +HR ++ Q G
Sbjct: 651 KQPSDEQHLGKESLPSQQSTVSNHHRKESIPSKQPTEG 688
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 363 EVWTGYALSYLPEQWLLYFSK 301
+++ G + Y P +WL +FSK
Sbjct: 570 DIYIGSTVCYSPNEWLDFFSK 590
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 326 NNGSCILANCAG-SITSNISSISPKNITSFCEHVLGQNLRRPRTTGSV 186
N S + +G I + +I+P+ IT +HV G ++ P GS+
Sbjct: 228 NTLSVLRTRASGFGIKIELDNITPELITKSAKHVFGIFVQYPAADGSI 275
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 25.0 bits (52), Expect = 7.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 377 LSATWKCGLDTHLAICRNNGSCILANCAGSITSNISSISPKNITS 243
L+ K H + N AN S+ SN+SSIS K+ ++
Sbjct: 545 LAMVSKAAWHKHWIVVENGSLWEYANWKDSVKSNVSSISLKHASA 589
>SPBC19C2.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 366
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 485 CSLLIRYRAGNIIGIIT*LFSSINDIMYSL 396
C LI R I G+ FSS+ND SL
Sbjct: 258 CDSLIEARPNTIHGVTESYFSSLNDTFPSL 287
>SPBC1289.13c |||alpha-1,2-galactosyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 375
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 238 QKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHF 363
QK +FL E IL+ + EPL +++ ++S F
Sbjct: 33 QKVQLFLNEHSSILNAVYETTTIVYTEPLHTSVSETITSTSF 74
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 151 NRPAERGTAINTSPYEEVAAPSLE 80
NRP R ++ + +EE A PSLE
Sbjct: 539 NRPILRLYSVPPNTFEEAAGPSLE 562
>SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 401
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 277 LDVIEPAQFAKIQEPLFRQI 336
LDV EP QF + PLF+ I
Sbjct: 320 LDVREPVQFGICRLPLFKNI 339
>SPCC736.02 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 286
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/62 (19%), Positives = 31/62 (50%)
Frame = +1
Query: 319 PLFRQIAKCVSSPHFQVAERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQT 498
P+ RQ+ K V+ + + + F + ME+N+ ++ I+F I ++ ++++
Sbjct: 186 PVIRQVGKIVTERLISIPDDEVEFCFLTWFEYTMEQNSVELLDIVFGFWNNIIEKRFSKS 245
Query: 499 IV 504
+
Sbjct: 246 FI 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,281,624
Number of Sequences: 5004
Number of extensions: 48035
Number of successful extensions: 161
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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