Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N09
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0701 - 26925252-26925578,26929233-26930513 220 7e-58
08_01_0153 - 1200121-1200465,1201693-1202920,1204517-1204602,120... 219 9e-58
04_04_0297 - 24219497-24219853,24221242-24222414 218 3e-57
07_01_1111 + 10279778-10280065,10280265-10280340,10280734-102819... 214 5e-56
05_01_0535 - 4610339-4610707,4611910-4613049,4613342-4613419 210 7e-55
05_07_0056 + 27382708-27383871,27384450-27384818 206 9e-54
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 155 3e-38
09_06_0136 - 21074420-21074746,21075905-21077026 144 5e-35
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 136 8e-33
10_06_0179 - 11508235-11508245,11508555-11508942 29 1.9
06_01_0016 + 184804-185025,185121-185237,185324-185737,185827-18... 29 3.3
03_05_0401 - 23819230-23819829,23822612-23823194,23823303-23824027 28 4.3
11_03_0047 - 9311913-9312659 28 5.7
08_01_0408 - 3616655-3617108,3617190-3617596,3618120-3618287 28 5.7
04_03_0241 - 13243938-13244453,13244538-13246334 28 5.7
01_03_0201 + 13758227-13758760,13758784-13759452 27 7.5
08_01_0593 + 5243646-5243800,5243954-5244227 27 10.0
06_03_1477 + 30408296-30409123,30409227-30410264 27 10.0
01_05_0735 - 24749975-24750601,24751411-24751541,24752150-247523... 27 10.0
>03_05_0701 - 26925252-26925578,26929233-26930513
Length = 535
Score = 220 bits (537), Expect = 7e-58
Identities = 99/182 (54%), Positives = 131/182 (71%)
Frame = +1
Query: 7 GELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATL 186
GELLEILGSIINGFALP+K EHK F ++YH QL+YC+VQF+EKD L
Sbjct: 308 GELLEILGSIINGFALPMKEEHKLFLSRALIPLHKPKSVAIYHQQLSYCIVQFVEKDYKL 367
Query: 187 TEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQ 366
+ V+RGLLK+WP QKEV+FLGE+EE+L+ +PA+F + PLF+QI +C++S HFQ
Sbjct: 368 ADTVIRGLLKYWPVINCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNSSHFQ 427
Query: 367 VAERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFMEMN 546
VAERAL+ WNN++I+SL+ +N VI PI+F AL R HWNQ + L NV K F++M+
Sbjct: 428 VAERALFLWNNDHIVSLIAQNRSVIFPIIFEALERNITSHWNQAVHGLTANVRKMFLDMD 487
Query: 547 SK 552
S+
Sbjct: 488 SE 489
>08_01_0153 -
1200121-1200465,1201693-1202920,1204517-1204602,
1205145-1205272,1205957-1205969
Length = 599
Score = 219 bits (536), Expect = 9e-58
Identities = 101/177 (57%), Positives = 131/177 (74%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLEILGSIINGFALPLK EHK F S+YH QL+YCV QF+EKD L
Sbjct: 367 ELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCVSMYHQQLSYCVTQFVEKDCKLA 426
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
+ V+RGLLK+WP T S KEVMFLGE+EE+L+ +PA+F + LF QIA+C++S HFQV
Sbjct: 427 DTVIRGLLKYWPITNSAKEVMFLGELEEVLEATQPAEFQRCMVSLFCQIARCLNSSHFQV 486
Query: 370 AERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFME 540
AERAL+ WNN++I L+++N++VI+PI+ PA+ R +KEHWNQ + +L NV K FM+
Sbjct: 487 AERALFLWNNDHIEVLIKQNSKVILPIILPAIERNTKEHWNQAVQSLSLNVRKIFMD 543
>04_04_0297 - 24219497-24219853,24221242-24222414
Length = 509
Score = 218 bits (532), Expect = 3e-57
Identities = 101/180 (56%), Positives = 132/180 (73%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLEILGSIINGFALPLK EHK F S+YH QL+YC+ QF+EKD L
Sbjct: 273 ELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCVSMYHQQLSYCITQFVEKDCKLA 332
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
+ V+RGLLK+WP T S KEVMFLGE+EE+L+ +PA+F + PLFRQIA ++S HFQV
Sbjct: 333 DTVIRGLLKYWPVTNSSKEVMFLGELEEVLEATQPAEFQRCMVPLFRQIACSMNSSHFQV 392
Query: 370 AERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFMEMNS 549
AERAL+ WNN++I +L+++N +VI+PI+FPAL R ++ HWNQ + +L NV K F + +S
Sbjct: 393 AERALFLWNNDHIENLIKQNYKVILPIIFPALERNARGHWNQAVRSLTLNVRKIFSDHDS 452
>07_01_1111 +
10279778-10280065,10280265-10280340,10280734-10281944,
10283779-10284138
Length = 644
Score = 214 bits (522), Expect = 5e-56
Identities = 101/177 (57%), Positives = 128/177 (72%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLEILGSIINGFALPLK EHK F +LYH QL+Y + QF+EKD L
Sbjct: 407 ELLEILGSIINGFALPLKEEHKLFLVRTLIPLHKPKCIALYHQQLSYSITQFVEKDCKLA 466
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
+ V+RGL+K+WP T S KEVMFLGE+EEILD +PA+F K PLFRQIA C++S HFQV
Sbjct: 467 DTVIRGLIKYWPITNSTKEVMFLGELEEILDATQPAEFQKCMVPLFRQIACCLNSSHFQV 526
Query: 370 AERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFME 540
AERAL+ WNN++I +L+ +N++VI+PI+F AL + EHWNQ + +L NV K F +
Sbjct: 527 AERALFLWNNDHIENLIRQNSKVILPIIFSALEKNVIEHWNQAVKSLSLNVQKLFSD 583
>05_01_0535 - 4610339-4610707,4611910-4613049,4613342-4613419
Length = 528
Score = 210 bits (512), Expect = 7e-55
Identities = 94/179 (52%), Positives = 128/179 (71%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLE+ GS+I+GFA PLK EHK F +Y QL YC++QF+EK+ L
Sbjct: 288 ELLEVFGSVISGFAKPLKEEHKLFLWKALVPLHKPKTVGVYLPQLTYCIIQFIEKEPKLA 347
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
V+RGLLK+WP T SQKE+MFLGE+EE+L++ E A+F K PLFR+IA C++S HFQV
Sbjct: 348 GTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTEMAEFQKCMVPLFRRIAHCLNSSHFQV 407
Query: 370 AERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFMEMN 546
AERAL+ WNNE++ L+ +N Q IMPI++PAL R ++ HWNQ+++ + NV K F+EM+
Sbjct: 408 AERALFLWNNEHLFDLISQNRQTIMPIIYPALERNTRWHWNQSVLNVTMNVRKMFLEMD 466
>05_07_0056 + 27382708-27383871,27384450-27384818
Length = 510
Score = 206 bits (503), Expect = 9e-54
Identities = 98/179 (54%), Positives = 123/179 (68%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLE+ GS+I+GFALPLK EHK F +Y QL YCV QF+EKD L
Sbjct: 270 ELLEVFGSVISGFALPLKEEHKIFLWRVLVPLHKPKSVGVYLQQLTYCVTQFIEKDPKLA 329
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
V+ GLL++WP T SQKEVMFL EIEEIL+ I A+F K PLFR+IA+C+ S HFQV
Sbjct: 330 SSVIIGLLRYWPITNSQKEVMFLSEIEEILETISTAEFQKCMVPLFRRIAQCIKSSHFQV 389
Query: 370 AERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWNQTIVALRYNVLKDFMEMN 546
AERAL+ WNN+ ++SL+ +N Q+IMPI+ PAL S+ HWNQ ++ L NV K F EM+
Sbjct: 390 AERALFIWNNDNVISLIAQNRQMIMPIIVPALEHNSQNHWNQAVLNLTDNVKKMFSEMD 448
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 155 bits (375), Expect = 3e-38
Identities = 72/120 (60%), Positives = 86/120 (71%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLEILGSIINGFALPLK EHK F +YH QL+YC+ QF+EKD L
Sbjct: 548 ELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCIGMYHQQLSYCITQFVEKDCKLA 607
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
+ V+RGLLK+WP T S KEV+FLGE+EEIL+ +PA+F K PLFRQIA C++S HFQV
Sbjct: 608 DTVIRGLLKYWPITNSSKEVLFLGELEEILEATQPAEFQKCMVPLFRQIAHCLNSSHFQV 667
>09_06_0136 - 21074420-21074746,21075905-21077026
Length = 482
Score = 144 bits (348), Expect = 5e-35
Identities = 71/170 (41%), Positives = 101/170 (59%), Gaps = 5/170 (2%)
Frame = +1
Query: 7 GELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATL 186
GELLE+ GSIINGFA+PLK EH+ F YH QLAYCV+QF+ KD L
Sbjct: 255 GELLEVCGSIINGFAVPLKEEHRAFMARVLLPLHRTRWVHTYHRQLAYCVLQFVHKDPGL 314
Query: 187 TEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQ 366
VR +L+ WP T QKEV+ + E+EEI+++++ F K+ P+ +IA+CVSS Q
Sbjct: 315 AGAAVRDILRHWPATNCQKEVLLIDELEEIVEILDQHHFDKLVVPVCSRIARCVSSCSSQ 374
Query: 367 VAERALYFWNNEYIMSLM-----EENNQVIMPIMFPALYRISKEHWNQTI 501
VAERALY WNNE +++ + I+P ++ + HW++ +
Sbjct: 375 VAERALYVWNNERFVAMACAAGPAAMEERILPAFVASMEANLERHWSRCV 424
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 136 bits (330), Expect = 8e-33
Identities = 62/120 (51%), Positives = 82/120 (68%)
Frame = +1
Query: 10 ELLEILGSIINGFALPLKSEHKQFXXXXXXXXXXXXXXSLYHAQLAYCVVQFLEKDATLT 189
ELLE+ GS+I+GFA PLK EHK F +Y QL YC+ QF+EK+ L
Sbjct: 257 ELLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKTVGVYLPQLTYCITQFIEKETKLA 316
Query: 190 EPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQV 369
V+RGLLK+WP T SQKE+MFLGE+EE+L++ + A+F K PLFR+IA C++S HFQ+
Sbjct: 317 GTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMVPLFRRIASCLNSSHFQL 376
>10_06_0179 - 11508235-11508245,11508555-11508942
Length = 132
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -1
Query: 205 PAQRALLAWHPSQETAPRNRPAERGTAINTSPYEEVAAPSLEIVYAHSSEAGQIRLLYFL 26
PA A PS A PA+ G A T+P V+AP+L A S AG + + L
Sbjct: 68 PAPPMSPASSPSDAAAAAPGPADAGAA--TAPSSGVSAPALAPAAAGKSAAGAVSASFRL 125
Query: 25 I 23
+
Sbjct: 126 V 126
>06_01_0016 +
184804-185025,185121-185237,185324-185737,185827-186888
Length = 604
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 483 LFADPV--QSGEHYRHYHLIVFLHQ*HNVFIVPEIKRPLSHLEVWTGYALSYLPEQW 319
L DPV SG+ Y + +L H P+ ++PLSH + + L L QW
Sbjct: 240 LMQDPVIVSSGQTYERSCIQKWLDSGHKT--CPKTQQPLSHTSLTPNFVLKSLISQW 294
>03_05_0401 - 23819230-23819829,23822612-23823194,23823303-23824027
Length = 635
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 193 ALLAWHPSQETAPRNRPAERGTAINTSPYEEVAAPSLEIVYAHS 62
++L +HP +E N+ ERG A + + ++ AP L HS
Sbjct: 407 SILGFHPYKEVIFLNQNKERGLAYHFNSSKKSLAPPLSTTGTHS 450
>11_03_0047 - 9311913-9312659
Length = 248
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = -3
Query: 341 LAICRNNGSCILANCAGSITSNISSISPKNIT--SFCEHVLGQNLR 210
LA R S C G ITS+ SS SP + T SFC+ + ++LR
Sbjct: 40 LAEIRELASSSPEPCRGLITSSSSSSSPSSPTTGSFCDGIDHKSLR 85
>08_01_0408 - 3616655-3617108,3617190-3617596,3618120-3618287
Length = 342
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/50 (24%), Positives = 21/50 (42%)
Frame = -1
Query: 199 QRALLAWHPSQETAPRNRPAERGTAINTSPYEEVAAPSLEIVYAHSSEAG 50
+R + WHP + + + AE + YE ++ P +Y E G
Sbjct: 25 RRMAMKWHPDKNPGDKKKEAEAKFKKISEAYEVLSDPQKRAIYDKYGEEG 74
>04_03_0241 - 13243938-13244453,13244538-13246334
Length = 770
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 262 EIEEILDVIEPAQFAKIQEPLFRQIAKCVSSPHFQVAERA 381
EIEE L +E A A +EPL + C ++ H A +A
Sbjct: 536 EIEEALARMEVAVAAATEEPLLSPQSPCWTAVHLPAANKA 575
>01_03_0201 + 13758227-13758760,13758784-13759452
Length = 400
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 178 ATLTEPVVRGLLKFWPKTCSQKEVMFLGEIEEILDVIEPAQFAKIQEPLFRQIAKCVS 351
A+L E V+ +LKFW T M L +L ++ + +QEP+F +AKC S
Sbjct: 340 ASLMEVVL--VLKFWGNTLLAVAAMLL-----LLALLTAFRLC-LQEPMFATVAKCFS 389
>08_01_0593 + 5243646-5243800,5243954-5244227
Length = 142
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -2
Query: 495 LVPVLFADPVQSGEHYRHYHLI 430
L PV+ ADPV + + Y+ +H++
Sbjct: 119 LFPVIAADPVDNEKKYKKFHML 140
>06_03_1477 + 30408296-30409123,30409227-30410264
Length = 621
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 393 PEIKRPLSHLEVWTGYALSYLPEQW 319
P+ ++PL HL + YAL L QW
Sbjct: 295 PKTQQPLGHLSLAPNYALKNLIMQW 319
>01_05_0735 -
24749975-24750601,24751411-24751541,24752150-24752336,
24753801-24753898,24754182-24754689
Length = 516
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1
Query: 100 VAAPSLEIVYAHSSEAGQIRLLYFLIFLTV 11
+AA LEI+Y S G ++L +F+I + V
Sbjct: 196 LAADCLEIMYTSLSPNGPLKLYHFIIIVAV 225
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,731,104
Number of Sequences: 37544
Number of extensions: 304983
Number of successful extensions: 809
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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