Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N09
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          26   0.29 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      26   0.29 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   8.3  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    21   8.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   8.3  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -2

Query: 357 WTGYALSY--LPEQWLLYFSKLCWLNHVQYLFN 265
           +TG+ L+   +PEQ L YF++   LNH  ++ N
Sbjct: 204 YTGWYLTKHNVPEQRLNYFTEDVGLNHFYFMLN 236


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -2

Query: 357 WTGYALSY--LPEQWLLYFSKLCWLNHVQYLFN 265
           +TG+ L+   +PEQ L YF++   LNH  ++ N
Sbjct: 204 YTGWYLTKHNVPEQRLNYFTEDVGLNHFYFMLN 236


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 367 VAERALYFWNNEYIMSLMEENNQVIMPIMFPALYRISKEHWN 492
           V ERAL    N +I+SL   +  V + +M  A+Y +    W+
Sbjct: 212 VRERALQTVTNYFIVSLAVADLLVAVLVMPFAVYVLVNGSWS 253


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 307 KIQEPLFRQIAKCVSSPHF 363
           K +EP   +I++  SSPHF
Sbjct: 613 KYEEPTVGEISQDGSSPHF 631


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +3

Query: 423 GKQSSDNAYNVPRSVPDQQRALEPNHRGSTLQRAQRLH 536
           G + +DN  N  R   +Q    + N   + +  + +LH
Sbjct: 507 GNRQNDNKRNGNRQNDNQNNQNDNNRNDNQVHHSSKLH 544


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 154 RNRPAERGTAINTSPYEEVAAPSLEIVY 71
           R R  ERG+ +     E  + PSL+I Y
Sbjct: 33  RFRRQERGSIVIQGTKEGKSRPSLDIDY 60


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = -2

Query: 453 HYRHYHLI-VFLHQ 415
           HY+HYH+  VF  Q
Sbjct: 7   HYQHYHITPVFTKQ 20


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,828
Number of Sequences: 438
Number of extensions: 3156
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)