Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N06
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    30   0.040
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    30   0.040
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    30   0.040
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    25   2.0  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    24   3.4  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    24   3.4  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   7.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.9  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 0.040
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 389 IPRPGEVLGLVGQNGIGKSTALKILAGKPKPNL 487
           + + GE+L ++G +G GK+T L  LA +  P +
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSPPGV 154


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 0.040
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 389 IPRPGEVLGLVGQNGIGKSTALKILAGKPKPNL 487
           + + GE+L ++G +G GK+T L  LA +  P +
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSPPGV 154


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 30.3 bits (65), Expect = 0.040
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 389 IPRPGEVLGLVGQNGIGKSTALKILAGKPKPNL 487
           + + GE+L ++G +G GK+T L  LA +  P +
Sbjct: 100 VAKSGELLAVMGSSGAGKTTLLNALAFRSPPGV 132


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 291 PLTRSPSSIFHQIWRNTPLIVIPRILSNFTGYQ 389
           P+T+  ++ FH +  N+   V  R+L N T  Q
Sbjct: 257 PVTKFRTAYFHALSSNSEFTVSTRVLRNETASQ 289


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 484 IGFWFSCKNL*GSGLAN 434
           +GFW  C+ L   GLAN
Sbjct: 80  VGFWDDCQGLKLDGLAN 96


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 484 IGFWFSCKNL*GSGLAN 434
           +GFW  C+ L   GLAN
Sbjct: 80  VGFWDDCQGLKLDGLAN 96


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 134 DRCKPKRCRQECKKSCPVVRMGKLCIEVTPNDKIATI 244
           D C P    QEC  +CP     K C ++    K  T+
Sbjct: 33  DLCGPNEEFQECGTACP-----KTCADLNDLPKACTL 64


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 161 QECKKSCPVVRMGKLCIEVTPNDKIATISEELCIGC 268
           Q C++ C   + G+ C +  P D  A     +C+ C
Sbjct: 654 QFCQE-CTGYKKGEQCEDECPQDFYANEETRICLPC 688


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,842
Number of Sequences: 2352
Number of extensions: 12670
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)