Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N06
(511 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 24 0.79
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 24 0.79
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 2.4
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 2.4
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 2.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 3.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 3.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 4.2
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 5.6
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 7.4
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 21 7.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 7.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 7.4
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 7.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 9.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 9.8
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 24.2 bits (50), Expect = 0.79
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 152 RCRQECKKSCPVVRMGKLCIEV 217
RC C++ CP V LCI++
Sbjct: 45 RCDGRCQRFCPNVVPKPLCIKI 66
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 24.2 bits (50), Expect = 0.79
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 152 RCRQECKKSCPVVRMGKLCIEV 217
RC C++ CP V LCI++
Sbjct: 45 RCDGRCQRFCPNVVPKPLCIKI 66
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.6 bits (46), Expect = 2.4
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 293 FDAITIINIPSNLEKHTTHRYSKNSFKLHRLPIPRPGEVLGLVGQNGIGKSTALKI 460
F+A + NI + K + ++ + H LPI G L Q G GK+ A +
Sbjct: 198 FEAAGLRNIVLDNIKKSGYK-KPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAV 252
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 13 KRTRERRQSIANVRSFISSDVPKTR 87
+RT+ER QS S + SD+P R
Sbjct: 185 QRTKERDQSEVESTSSLHSDMPIER 209
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 2.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 13 KRTRERRQSIANVRSFISSDVPKTR 87
+RT+ER QS S + SD+P R
Sbjct: 185 QRTKERDQSEVESTSSLHSDMPIER 209
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 3.2
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +2
Query: 8 VVKGHANVGKVSPTFALLSAVMSRKRDNEETDKLTRIAIVNADRCKPKRCRQECKKSCPV 187
V K NVG +S ALL + + E++ T+ PK+ R+ + PV
Sbjct: 752 VAKNKKNVGSMSRNKALLPVIKPANVNKEQSPNSTK-------ETTPKKERKTATTTQPV 804
Query: 188 VRMGK 202
+ K
Sbjct: 805 ISSRK 809
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.2 bits (45), Expect = 3.2
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 230 KIATISEELCIGCGI 274
K+ TI + C+ CG+
Sbjct: 534 KVETIGDAYCVACGL 548
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -3
Query: 260 YTVLQRWSLFYHWVLLRCTVCPYAQLGN 177
Y V+ W++FY ++ +R + P+ N
Sbjct: 77 YIVILAWAIFYFFMSMRSEL-PWGSCNN 103
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 5.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 313 DDGDRVKGAFLYTNTAPNTQFFRDGRYF 230
D+GDR+ + N N GRYF
Sbjct: 351 DNGDRIFAEYDIINIQENGDQVSVGRYF 378
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 124
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.0 bits (42), Expect = 7.4
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 324 QIWRNTPLIVIPR 362
+IWRN + +PR
Sbjct: 73 EIWRNKLFVTVPR 85
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 357
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 7.4
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 314 NIPSNLEKHTTHRYSKNSFKLH---RLPIPRP 400
N +N + H Y+K + ++ ++PIP P
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQIPIPVP 357
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 7.4
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +2
Query: 257 CIGCGICVKKCPF 295
C+GCG KC +
Sbjct: 36 CLGCGDSCHKCKY 48
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 9.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2
Query: 249 SEMVAILSLGVTSMHSLPIRTTG 181
S + A +SLGVT++ ++ +T+G
Sbjct: 268 SAVPARVSLGVTTLLTMATQTSG 290
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 9.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -2
Query: 249 SEMVAILSLGVTSMHSLPIRTTG 181
S + A +SLGVT++ ++ +T+G
Sbjct: 268 SAVPARVSLGVTTLLTMATQTSG 290
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,516
Number of Sequences: 438
Number of extensions: 3819
Number of successful extensions: 24
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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