BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_N05
(223 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 22 2.9
CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply, Sphingosine... 21 3.9
AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding pr... 21 3.9
AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding pr... 21 3.9
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 21 5.1
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 21 5.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 21 6.8
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 21 6.8
>AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive
protein 2 protein.
Length = 439
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 36 LKSKYNNLRLTLGL 77
LKSKY +L++ LGL
Sbjct: 96 LKSKYPSLKVLLGL 109
>CR954257-10|CAJ14161.1| 519|Anopheles gambiae Sply,
Sphingosine-phosphate lyase protein.
Length = 519
Score = 21.4 bits (43), Expect = 3.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 99 YFTCKAL*DRESSGDYCICFL 37
Y +++ DRE GD+ CF+
Sbjct: 485 YGVAQSVPDRELIGDFTKCFI 505
>AY146747-1|AAO12062.1| 288|Anopheles gambiae odorant-binding
protein AgamOBP42 protein.
Length = 288
Score = 21.4 bits (43), Expect = 3.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 75 DRESSGDYCICFLK 34
D E GDYC+ L+
Sbjct: 225 DNELEGDYCVARLR 238
>AJ618931-1|CAF02009.1| 288|Anopheles gambiae odorant-binding
protein OBPjj83d protein.
Length = 288
Score = 21.4 bits (43), Expect = 3.9
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -2
Query: 75 DRESSGDYCICFLK 34
D E GDYC+ L+
Sbjct: 225 DNELEGDYCVARLR 238
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 104 NTTLRVKLYETESQAEIIVFAF 39
+TT++ L S AE I+F F
Sbjct: 522 HTTIKYALKMLSSSAETIIFMF 543
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 21.0 bits (42), Expect = 5.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 154 RPTITVCYIYYNVMYH*ILLY 92
RP V Y YYN + I +Y
Sbjct: 1298 RPAYVVVYDYYNTNLNAIKVY 1318
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 20.6 bits (41), Expect = 6.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 196 GNRQRGGARSPRDTR 152
G+R+RGG+ + R+ R
Sbjct: 415 GSRRRGGSTTDREKR 429
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 20.6 bits (41), Expect = 6.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 196 GNRQRGGARSPRDTR 152
G+R+RGG+ + R+ R
Sbjct: 416 GSRRRGGSTTDREKR 430
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,673
Number of Sequences: 2352
Number of extensions: 3211
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 51
effective length of database: 444,027
effective search space used: 9768594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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