Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N04
         (533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   279   1e-75
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   279   1e-75
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    50   2e-06
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    50   2e-06
X07134-1|CAA30146.1|  349|Drosophila melanogaster protein ( D. m...    28   9.2  
X07133-1|CAA30145.1|  304|Drosophila melanogaster protein ( D. m...    28   9.2  
X07132-1|CAA30144.1|  643|Drosophila melanogaster protein ( D. m...    28   9.2  
X07131-1|CAA30143.1|  616|Drosophila melanogaster protein ( D. m...    28   9.2  
X06742-1|CAA29917.1|  656|Drosophila melanogaster Shaker protein.      28   9.2  
X06184-1|CAA29549.1|  304|Drosophila melanogaster protein ( Dros...    28   9.2  
M17211-1|AAA28417.1|  616|Drosophila melanogaster protein ( D.me...    28   9.2  
AY118398-1|AAM48427.1|  571|Drosophila melanogaster RE58855p pro...    28   9.2  
AE014298-2648|AAS65396.1|  349|Drosophila melanogaster CG12348-P...    28   9.2  
AE014298-2647|AAN09452.1|  304|Drosophila melanogaster CG12348-P...    28   9.2  
AE014298-2646|AAF48786.3|  655|Drosophila melanogaster CG12348-P...    28   9.2  
AE014298-2645|AAF48790.2|  643|Drosophila melanogaster CG12348-P...    28   9.2  
AE014298-2644|AAS65395.1|  616|Drosophila melanogaster CG12348-P...    28   9.2  
AE014298-2643|AAF48785.3|  616|Drosophila melanogaster CG12348-P...    28   9.2  
AE014298-2642|AAN09451.1|  571|Drosophila melanogaster CG12348-P...    28   9.2  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  279 bits (685), Expect = 1e-75
 Identities = 128/148 (86%), Positives = 143/148 (96%)
 Frame = +2

Query: 14  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 193
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 194 GKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 373
           GKEKF+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 374 LLVADPRRCEPKKFGGPGARARYQKSYR 457
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  279 bits (685), Expect = 1e-75
 Identities = 128/148 (86%), Positives = 143/148 (96%)
 Frame = +2

Query: 14  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 193
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 194 GKEKFSGVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 373
           GKEKF+GVDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 374 LLVADPRRCEPKKFGGPGARARYQKSYR 457
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = +2

Query: 65  KKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKG 241
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 242 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 421
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 422 PGARARY 442
            GAR +Y
Sbjct: 384 EGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = +2

Query: 65  KKTATA-VAYCKRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSGVDIRVTVKG 241
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 242 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 421
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 422 PGARARY 442
            GAR +Y
Sbjct: 384 EGARRKY 390


>X07134-1|CAA30146.1|  349|Drosophila melanogaster protein ( D.
           melanogaster larvalShaker ShE mRNA for put.
           K(+)-channel. ).
          Length = 349

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>X07133-1|CAA30145.1|  304|Drosophila melanogaster protein ( D.
           melanogaster larvalShaker mRNA for put. K(+)-channel. ).
          Length = 304

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257


>X07132-1|CAA30144.1|  643|Drosophila melanogaster protein ( D.
           melanogaster (latepopul.) Shaker ShB mRNA for put.
           K(+)-channel.).
          Length = 643

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 260 VPDITDPFFLIETLCIIWFTFELTVRFLACP 290


>X07131-1|CAA30143.1|  616|Drosophila melanogaster protein ( D.
           melanogaster adultShaker ShA mRNA for put. K(+)-channel.
           ).
          Length = 616

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>X06742-1|CAA29917.1|  656|Drosophila melanogaster Shaker protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>X06184-1|CAA29549.1|  304|Drosophila melanogaster protein (
           Drosophila mRNA forShaker (Sh) protein. ).
          Length = 304

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257


>M17211-1|AAA28417.1|  616|Drosophila melanogaster protein (
           D.melanogaster potassiumchannel (Shaker) mRNA, complete
           cds. ).
          Length = 616

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>AY118398-1|AAM48427.1|  571|Drosophila melanogaster RE58855p
           protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257


>AE014298-2648|AAS65396.1|  349|Drosophila melanogaster CG12348-PF,
           isoform F protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>AE014298-2647|AAN09452.1|  304|Drosophila melanogaster CG12348-PA,
           isoform A protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257


>AE014298-2646|AAF48786.3|  655|Drosophila melanogaster CG12348-PE,
           isoform E protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>AE014298-2645|AAF48790.2|  643|Drosophila melanogaster CG12348-PC,
           isoform C protein.
          Length = 643

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 260 VPDITDPFFLIETLCIIWFTFELTVRFLACP 290


>AE014298-2644|AAS65395.1|  616|Drosophila melanogaster CG12348-PG,
           isoform G protein.
          Length = 616

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>AE014298-2643|AAF48785.3|  616|Drosophila melanogaster CG12348-PB,
           isoform B protein.
          Length = 616

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 272 VPDITDPFFLIETLCIIWFTFELTVRFLACP 302


>AE014298-2642|AAN09451.1|  571|Drosophila melanogaster CG12348-PD,
           isoform D protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 432 VPDTRNPTVNIISICIVWYRLDLYALINAIP 524
           VPD  +P   I ++CI+W+  +L     A P
Sbjct: 227 VPDITDPFFLIETLCIIWFTFELTVRFLACP 257


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,323,956
Number of Sequences: 53049
Number of extensions: 604397
Number of successful extensions: 1532
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1530
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)