Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N02
         (310 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    27   0.068
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   0.84 
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   0.84 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   2.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   4.5  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              20   5.9  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    20   5.9  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    20   7.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   7.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   7.8  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     20   7.8  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 26.6 bits (56), Expect = 0.068
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = +1

Query: 109 GKDKEEP*ECKVQGPLLSVPVH-PRHHGQGEGRET-ETEFTSRS 234
           GK+ E+P  C + G   +VP    RH+    G +  + E+ S+S
Sbjct: 85  GKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKS 128


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 22  ERHYTLHHAA*NQGYQRFFVESA*ERCQIGKDKEEP*ECK 141
           ERH TLHH     G +    E+     +I     EP ECK
Sbjct: 101 ERHITLHHCYDADGIKLMNEENGVMEIKI----REPVECK 136


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 22  ERHYTLHHAA*NQGYQRFFVESA*ERCQIGKDKEEP*ECK 141
           ERH TLHH     G +    E+     +I     EP ECK
Sbjct: 101 ERHITLHHCYDADGIKLMNEENGVMEIKI----REPVECK 136


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +2

Query: 17  SVSDITHFI-MPREIKDIKDFLLKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDK 193
           S+ D  + I M + I   K  + K    D    KI    ENV+  + C+   ++ V  D 
Sbjct: 18  SIKDFQNAIRMGQSICMAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVDKDG 77

Query: 194 EKAEKLKQSL 223
              E + + +
Sbjct: 78  NFNEHVSREI 87


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl
          cyclase alpha 1 subunit protein.
          Length = 699

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -2

Query: 42 MKCVMSLTLSKPSC 1
          M C  S  LSKP C
Sbjct: 1  MACPFSRDLSKPGC 14



 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 181 HHGQGEGRETETEFTSRSP 237
           HH    GRE  T FT   P
Sbjct: 320 HHLNRLGREISTYFTFTRP 338


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +2

Query: 98  DAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 223
           D    KI  + ENV   + C+   + +V  +    EK+   +
Sbjct: 46  DINEGKINMDDENVLLFIECTMKKFNVVDENANFNEKISSDI 87


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 6/32 (18%), Positives = 19/32 (59%)
 Frame = -1

Query: 283 IILLINPSHSLHFLNLETWR*TLFQFLCLLLV 188
           ++  ++    ++FLN+ +    +F  +C++L+
Sbjct: 225 LVRYVSQWEEVYFLNMASVFMRIFNLICMMLL 256


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -1

Query: 262 SHSLHFLNLE 233
           SHSL+++N+E
Sbjct: 273 SHSLYYVNME 282


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 5   EGFDSVSDITHFIMPREIKDIKDFL 79
           E     SDIT   + +  KD+  F+
Sbjct: 456 ESIQRKSDITELDVSKRCKDLASFM 480


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 167  LYTLVITDKEKAEKLKQSLP 226
            LYT V+  +E+    K++LP
Sbjct: 1249 LYTRVVDGREELNHGKRTLP 1268


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 167  LYTLVITDKEKAEKLKQSLP 226
            LYT V+  +E+    K++LP
Sbjct: 1245 LYTRVVDGREELNHGKRTLP 1264


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 5   EGFDSVSDITHFIMPREIKDIKDFL 79
           E     SDIT   + +  KD+  F+
Sbjct: 162 ESIQRKSDITELDVSKRCKDLASFM 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,056
Number of Sequences: 438
Number of extensions: 1063
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)