Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_N01
         (478 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   5.5  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   7.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    22   9.6  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 263 VIAIIKSMKLFVLYMLSRWDLE 198
           VIA+I  +     Y   RWDLE
Sbjct: 75  VIAVINKITFCSCYAPPRWDLE 96


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 102 VERSPISNLHQRNGLRPQHRHHHIPT 179
           V  + +++ H  +     H HHH PT
Sbjct: 489 VNGASLTHSHHAHPHHHHHHHHHHPT 514


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 156 HRHHHIPTRDLLV 194
           H HHH+P    LV
Sbjct: 285 HHHHHLPPSTALV 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,580
Number of Sequences: 2352
Number of extensions: 5852
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)