Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M24
         (388 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p pro...   161   3e-40
AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation i...   161   3e-40
AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,...   161   3e-40
AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,...   161   3e-40
AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,...   161   3e-40
AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,...   161   3e-40
AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,...   161   3e-40
AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,...   161   3e-40
AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,...   161   3e-40
AY052105-1|AAK93529.1|  626|Drosophila melanogaster SD05207p pro...    27   6.4  
AE014134-1911|AAN10757.1|  626|Drosophila melanogaster CG7400-PB...    27   6.4  
AE014134-1910|AAF52969.2|  626|Drosophila melanogaster CG7400-PA...    27   6.4  

>AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p
           protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation
           initiation factor 5C protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,
           isoform G protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,
           isoform F protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,
           isoform E protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,
           isoform D protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,
           isoform C protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,
           isoform B protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,
           isoform A protein.
          Length = 422

 Score =  161 bits (391), Expect = 3e-40
 Identities = 71/95 (74%), Positives = 85/95 (89%)
 Frame = +3

Query: 102 MSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKFLDSAGSKL 281
           MSQK E+PVLSGQRIKTRKRDE+EKYDP GFRDA++ GLE+  GDL+   K+LDSAG+KL
Sbjct: 1   MSQKTERPVLSGQRIKTRKRDEREKYDPTGFRDAVIAGLEKTEGDLEQISKYLDSAGNKL 60

Query: 282 DYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 386
           DYRRYGEV+FD+LIAGGLL+PGGS+S DGE P+T+
Sbjct: 61  DYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTS 95


>AY052105-1|AAK93529.1|  626|Drosophila melanogaster SD05207p
           protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 147 KTRKRD-EKEKYDPNGFRDAL 206
           K RK D +KE YDPN  +DAL
Sbjct: 579 KLRKVDLQKEGYDPNAIKDAL 599


>AE014134-1911|AAN10757.1|  626|Drosophila melanogaster CG7400-PB,
           isoform B protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 147 KTRKRD-EKEKYDPNGFRDAL 206
           K RK D +KE YDPN  +DAL
Sbjct: 579 KLRKVDLQKEGYDPNAIKDAL 599


>AE014134-1910|AAF52969.2|  626|Drosophila melanogaster CG7400-PA,
           isoform A protein.
          Length = 626

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +3

Query: 147 KTRKRD-EKEKYDPNGFRDAL 206
           K RK D +KE YDPN  +DAL
Sbjct: 579 KLRKVDLQKEGYDPNAIKDAL 599


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,624,038
Number of Sequences: 53049
Number of extensions: 308192
Number of successful extensions: 1060
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)