Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M21
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   175   8e-46
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     27   0.31 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   0.93 
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    25   0.93 
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     24   2.2  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   2.8  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  175 bits (425), Expect = 8e-46
 Identities = 90/124 (72%), Positives = 101/124 (81%)
 Frame = +2

Query: 62  KKRSKLFYKNTIV*LSLDFHTNKWICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGI 241
           KK SK+  +     L++DF TNK I EE+AIIPTKPLRNKIAGF THLM+RL HSQVRGI
Sbjct: 10  KKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGI 69

Query: 242 SIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQPATQRGYG 421
           SIKLQEEERERRDNYVP+VSALEQDIIEVD +TK+MLK LDF+NI  +QLT P T  GY 
Sbjct: 70  SIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI-VVQLTNP-TAPGYS 127

Query: 422 GRRN 433
            RRN
Sbjct: 128 NRRN 131



 Score = 41.1 bits (92), Expect = 2e-05
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +1

Query: 34 MGRVRTKTIKKAFKIILQKYYS 99
          MGRVRTKTIKKA K+I++KYY+
Sbjct: 1  MGRVRTKTIKKASKVIIEKYYT 22


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 27.1 bits (57), Expect = 0.31
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +2

Query: 236 GISIKLQEEERERRDNYVPEVSALE-QDIIEVDSDTKDMLKMLDFSN 373
           G + +L+EEE + +  + PE+   E  + ++V ++ K+M+ + D SN
Sbjct: 87  GTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-LQDISN 132


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.4 bits (53), Expect = 0.93
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +1

Query: 7   RIRHEDPAIMGRVRTKTIKKAFKII 81
           R+ H DPA++G ++ + +    K++
Sbjct: 282 RLEHRDPAVIGEMKRRDLVSWLKVV 306


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 25.4 bits (53), Expect = 0.93
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 65  KRSKL-FYKNTIV*LSLDFHTNKWICEEIAIIPTKPL 172
           KRS+  F  + +V L  +FH+N+++C    I  T+ L
Sbjct: 1   KRSRTAFTSSQLVELEKEFHSNRYLCRPRRIELTRKL 37


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 78  NFERFFYGLSPN 43
           NF++FFY L+PN
Sbjct: 129 NFKKFFYTLNPN 140


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 258 KRSVKGVTIMSQKYLL*NRISLKSI 332
           K  +K VT+M  K  + N ISLK++
Sbjct: 214 KMKMKSVTVMFPKMHISNSISLKNV 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,146
Number of Sequences: 2352
Number of extensions: 8677
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)