Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M19
(497 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 208 1e-55
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 27 0.47
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 24 3.3
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 23 5.8
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 5.8
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 23 7.6
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 23 7.6
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 23 7.6
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 23 7.6
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 23 7.6
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 23 7.6
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 23 7.6
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 23 7.6
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 7.6
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 208 bits (507), Expect = 1e-55
Identities = 92/120 (76%), Positives = 102/120 (85%)
Frame = +1
Query: 136 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYS 315
KNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+TCQ+AY
Sbjct: 8 KNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYR 67
Query: 316 RIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATEVTG 495
RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG D+LY G T+VTG
Sbjct: 68 RIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTG 127
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 26.6 bits (56), Expect = 0.47
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 85 HCADIIQEY*KWDRESSKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 264
H +I + K RE + + + KR+ V R GK++++ + V+ D+ + P+ R
Sbjct: 2 HIKQVIIQGFKSYREQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 23.8 bits (49), Expect = 3.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 272 TISRYFGVLYLFLSWTTRRL 213
TI RYF + + FLS T +L
Sbjct: 141 TIERYFAICHPFLSHTMSKL 160
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.0 bits (47), Expect = 5.8
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 280 ITVQSVGTLECCICFYPGQRGVCEHSSQ 197
+ QSV L C C P C+ S+Q
Sbjct: 19 LLAQSVSALRCYQCASPSSWSDCQASAQ 46
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 5.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 426 QQTSAVGSSIVSQTHLDTIAWEFM 355
++ SA+ + VSQ+ ++T WE +
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVL 193
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 271 QSVGTLECCICFYPGQRGVCEHSSQ 197
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 7.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 182 VVREKLTTMLANASLSRIKTNTTLQSTD 265
V+RE L + + +KTN +STD
Sbjct: 1983 VMREALVNLTRESCYQIVKTNEVPESTD 2010
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,051
Number of Sequences: 2352
Number of extensions: 11529
Number of successful extensions: 51
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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