Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M18
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 131 1e-30
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 131 1e-30
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 131 1e-30
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 131 1e-30
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 131 1e-30
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 128 8e-30
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 110 2e-24
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 38 0.011
AF209878-1|AAF40147.1| 98|Homo sapiens immunoglobulin heavy ch... 31 1.3
X74370-1|CAA52408.1| 543|Homo sapiens mucin protein. 29 6.8
U57057-1|AAB47807.1| 525|Homo sapiens WD protein IR10 protein. 29 9.0
BC011690-1|AAH11690.1| 525|Homo sapiens coronin, actin binding ... 29 9.0
BC000010-1|AAH00010.1| 525|Homo sapiens coronin, actin binding ... 29 9.0
AL137073-9|CAI13893.1| 525|Homo sapiens coronin, actin binding ... 29 9.0
AK126039-1|BAC86408.1| 214|Homo sapiens protein ( Homo sapiens ... 29 9.0
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 131 bits (316), Expect = 1e-30
Identities = 62/93 (66%), Positives = 70/93 (75%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 330
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 331 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNL 429
GK K R IWGKVTR HGNSG VRA+F+SNL
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNL 92
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 131 bits (316), Expect = 1e-30
Identities = 62/93 (66%), Positives = 70/93 (75%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 330
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 331 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNL 429
GK K R IWGKVTR HGNSG VRA+F+SNL
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNL 92
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 131 bits (316), Expect = 1e-30
Identities = 62/93 (66%), Positives = 70/93 (75%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 330
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 331 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNL 429
GK K R IWGKVTR HGNSG VRA+F+SNL
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNL 92
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 131 bits (316), Expect = 1e-30
Identities = 62/93 (66%), Positives = 70/93 (75%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 330
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 331 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNL 429
GK K R IWGKVTR HGNSG VRA+F+SNL
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNL 92
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 131 bits (316), Expect = 1e-30
Identities = 62/93 (66%), Positives = 70/93 (75%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 330
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 331 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNL 429
GK K R IWGKVTR HGNSG VRA+F+SNL
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVRAKFRSNL 92
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 128 bits (309), Expect = 8e-30
Identities = 61/93 (65%), Positives = 69/93 (74%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 330
GRL++KA+F GYKRGLRNQ E+TALLKIEG R + FY GKRC YVY+AK T PG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG- 61
Query: 331 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNL 429
GK K R IWGKVTR HGNSG V A+F+SNL
Sbjct: 62 --GKPNKTRVIWGKVTRAHGNSGMVLAKFRSNL 92
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 110 bits (265), Expect = 2e-24
Identities = 55/93 (59%), Positives = 64/93 (68%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQHENTALLKIEGTKDRSDALFYAGKRCVYVYRAKKRTPIPGG 330
GRL++K+ F GYKR L+NQ E+TALLKIEG + + FY GKRC VY+AK T IPG
Sbjct: 2 GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG- 60
Query: 331 PRGKKTKLRAIWGKVTRPHGNSGGVRARFKSNL 429
K K R IWGKVTR H NSG V A+F SNL
Sbjct: 61 --SKPNKSRVIWGKVTRAHRNSGMVAAKFHSNL 91
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 38.3 bits (85), Expect = 0.011
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 151 GRLYAKAVFTGYKRGLRNQ 207
GRL++KA+F GYKRGLRNQ
Sbjct: 3 GRLWSKAIFAGYKRGLRNQ 21
>AF209878-1|AAF40147.1| 98|Homo sapiens immunoglobulin heavy chain
variable region 194-118 protein.
Length = 98
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 429 QVRLEPGTDTTGVAMRAGHLAPDCTKLSFLATWTPGDRRPF 307
+V + T T+ M L P+ T + F AT TPGD PF
Sbjct: 48 RVTMTTDTSTSTAYMELRSLTPEDTSVYFCATRTPGDGWPF 88
>X74370-1|CAA52408.1| 543|Homo sapiens mucin protein.
Length = 543
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -2
Query: 373 PCPRLHEA*FSCHVDPRGSASFSLHGRHTRNACQHRKVHHCDPL 242
P PRLH D ++S H HT N H + H DPL
Sbjct: 376 PQPRLHSHPLLQPRDGTHASSVDQHNHHTHNHHTHNQWLHGDPL 419
>U57057-1|AAB47807.1| 525|Homo sapiens WD protein IR10 protein.
Length = 525
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 343 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 245
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>BC011690-1|AAH11690.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 343 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 245
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>BC000010-1|AAH00010.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 343 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 245
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>AL137073-9|CAI13893.1| 525|Homo sapiens coronin, actin binding
protein, 2A protein.
Length = 525
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 343 SCHVDPRGSASFSLHGRHTRNACQHRKVHHCDP 245
SCH D S SF+ +G C+ RK+ DP
Sbjct: 177 SCHQDVILSMSFNTNGSLLATTCKDRKIRVIDP 209
>AK126039-1|BAC86408.1| 214|Homo sapiens protein ( Homo sapiens
cDNA FLJ44051 fis, clone TESTI4033433. ).
Length = 214
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2
Query: 403 HHRSCHAGGSPCPRLHEA*FSCHVDPRGSASFSLHGRHTRNACQ 272
HH S GG P P+LH A SAS + H R+ CQ
Sbjct: 135 HHCSHCPGGQPGPQLHRAWTVWSWAVPSSASRACGDGHRRSTCQ 178
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,587,088
Number of Sequences: 237096
Number of extensions: 1501607
Number of successful extensions: 4451
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4444
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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