Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M17
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.18
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.18
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.18
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.18
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical ... 29 2.9
AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical ... 28 3.8
AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek (dictyos... 28 5.0
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 28 5.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 6.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 6.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 6.7
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 6.7
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective spe... 27 8.8
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPE 212
K+ ++P + T EVKE KSPTKK + PE
Sbjct: 1445 KSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
K + +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1706 KKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 227
K D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 132 APEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
+P+E + + +E P KSPTKK + PE + E
Sbjct: 1721 SPKEKSPEKAEEKP--KSPTKKEKSPEKSAAE 1750
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESN 218
K + +PE+ S K KSPTKK + PE +
Sbjct: 1579 KKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPE 212
K+ ++P + T EVKE KSPTKK + PE
Sbjct: 1445 KSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
K + +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1706 KKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 227
K D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 132 APEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
+P+E + + +E P KSPTKK + PE + E
Sbjct: 1721 SPKEKSPEKAEEKP--KSPTKKEKSPEKSAAE 1750
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESN 218
K + +PE+ S K KSPTKK + PE +
Sbjct: 1579 KKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPE 212
K+ ++P + T EVKE KSPTKK + PE
Sbjct: 1445 KSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
K + +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1706 KKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 227
K D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 132 APEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
+P+E + + +E P KSPTKK + PE + E
Sbjct: 1721 SPKEKSPEKAEEKP--KSPTKKEKSPEKSAAE 1750
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESN 218
K + +PE+ S K KSPTKK + PE +
Sbjct: 1579 KKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPE 212
K+ ++P + T EVKE KSPTKK + PE
Sbjct: 1445 KSPSSPTKKTGDEVKEKSPPKSPTKKEKSPE 1475
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
K + +PE+ EVK SP +KSP K E P+S K+
Sbjct: 1706 KKEKSPEKSVVEEVK-SPKEKSPEKAEEKPKSPTKK 1740
Score = 28.3 bits (60), Expect = 3.8
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIK--KSPTKKTEVPESNGKE 227
K D +PE+ + E+K SP+K KSP K E P S K+
Sbjct: 1544 KKDKSPEKSITEEIK-SPVKKEKSPEKVEEKPASPTKK 1580
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 132 APEEVTSTEVKESPIKKSPTKKTEVPESNGKE 227
+P+E + + +E P KSPTKK + PE + E
Sbjct: 1721 SPKEKSPEKAEEKP--KSPTKKEKSPEKSAAE 1750
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKTEVPESN 218
K + +PE+ S K KSPTKK + PE +
Sbjct: 1579 KKEKSPEKPASPTKKSENEVKSPTKKEKSPEKS 1611
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 138 EEVTSTEVKESPIKKSPTKKTEVPESNG-KENGTXXXXXXXXXXXXNGDAEESNDATENG 314
E + ++ + P ++ E PE N E+ + +++S+DA+EN
Sbjct: 6 ESSSGSDAEPDEKTDEPVREEENPEGNSTSEDNDEKEKAADSPESSSDQSDDSDDASENS 65
Query: 315 DVTEVKETGVKRKS 356
+E E K+K+
Sbjct: 66 SSSEPDEPAPKKKN 79
>AF040659-1|AAK39389.1| 332|Caenorhabditis elegans Hypothetical
protein ZK484.3 protein.
Length = 332
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 123 ADAAPEEVTSTEVKESPIKKS-PTKKTEVPESNGKENGT 236
A AA T T +K++PIKKS P+ +E + K+ G+
Sbjct: 117 AAAAAAAATLTSMKKAPIKKSVPSTSSEADSTTPKKKGS 155
>AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical
protein Y38E10A.7 protein.
Length = 286
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/55 (32%), Positives = 22/55 (40%)
Frame = +3
Query: 183 SPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKETGVK 347
SPT +T V +G N NG +EE+ AT GD T VK
Sbjct: 60 SPTTRTPVILVHGTTNSAGTFAPQAAYFRANGWSEETVYATTYGDAGVTTATNVK 114
>AF016448-8|AAW30665.1| 536|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform c protein.
Length = 536
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 135 PEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 230
P E T+ +VK+ K+SP KK +S GKEN
Sbjct: 122 PSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 27.9 bits (59), Expect = 5.0
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 135 PEEVTSTEVKESPIKKSPTKKTEVPESNGKEN 230
P E T+ +VK+ K+SP KK +S GKEN
Sbjct: 122 PSEQTNGQVKKKSDKQSPKKK---EKSEGKEN 150
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +3
Query: 159 VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKE 335
V+E P KK KKTE +S+ + + ++ DAT T+ K+
Sbjct: 9509 VEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQKVADATSKQKETDKKQ 9567
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +3
Query: 159 VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKE 335
V+E P KK KKTE +S+ + + ++ DAT T+ K+
Sbjct: 9529 VEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQKVADATSKQKETDKKQ 9587
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +3
Query: 159 VKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDATENGDVTEVKE 335
V+E P KK KKTE +S+ + + ++ DAT T+ K+
Sbjct: 9529 VEEKPKKKVLKKKTEKSDSSISQKSDTSKTVAESAGSSESETQKVADATSKQKETDKKQ 9587
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/57 (22%), Positives = 23/57 (40%)
Frame = +3
Query: 123 ADAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEES 293
A EE + E +E +++SP KK + P +++ + EES
Sbjct: 459 AKVESEEPSDNEEEEEEVEESPIKKDKTPRKYSRKSAAKVESTESSGNEEEEEVEES 515
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 123 ADAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGTXXXXXXXXXXXXNGDAEESNDA 302
A EE E +E +++SP KK + P + K++ AEE+N +
Sbjct: 597 AKVESEESFGNE-EEEEVEESPKKKGKTPRKSSKKSAAKEESEESSDDEEEEQAEETNGS 655
Query: 303 -TENGDVTEVKET 338
TE+ ++ E+
Sbjct: 656 HTESPTKSKTDES 668
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKT 200
+ D +EVT T + E P+KK+ ++T
Sbjct: 41 EVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 108 THS*KADAAPEEVTSTEVKESPIKKSPTKKTEVPESNGKENGT 236
T S A E T+T V+E +K SP+ T+ +G +GT
Sbjct: 71 TTSKPATTPTPEPTTTPVEEEKVKVSPSSSTKEYPDDGGYDGT 113
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKT 200
+ D +EVT T + E P+KK+ ++T
Sbjct: 41 EVDVVMDEVTETIISEEPVKKNKHQRT 67
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 120 KADAAPEEVTSTEVKESPIKKSPTKKT 200
+ D +EVT T + E P+KK+ ++T
Sbjct: 41 EVDVVMDEVTETIISEEPVKKNKHQRT 67
>AF003139-7|AAB54162.2| 512|Caenorhabditis elegans Defective
spermatogenesis protein 8 protein.
Length = 512
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 441 PLQLVGFPPPLSPSFRELSSLSPPP 367
P+QLV P PL+P+ + PPP
Sbjct: 50 PIQLVVQPTPLTPAITPCEAPPPPP 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,538,947
Number of Sequences: 27780
Number of extensions: 184135
Number of successful extensions: 966
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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