Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M16
         (414 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   5.8  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   5.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   7.7  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 367 EFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGD 257
           E   T  DN +   S + + D+  DE +V    DD D
Sbjct: 754 ENEDTKADNMNNNHSDQLTGDNSADERAVPNDADDDD 790


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 5.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 230 WKFETGKYYVTIIDAPG 280
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 7.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 104 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 199
           KR I +FE E  +      K+    D LKAER
Sbjct: 319 KRKIGEFEVERDQAAGILAKHDETYDALKAER 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,110
Number of Sequences: 2352
Number of extensions: 8506
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33777477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)