Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_M15
         (343 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   0.58 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   0.58 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   1.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.3  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    20   7.2  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 334 GYLFYLCVCVLIRVVSNK 281
           G+LF   +C+L++ V NK
Sbjct: 8   GFLFLASLCLLVQAVPNK 25


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 334 GYLFYLCVCVLIRVVSNK 281
           G+LF   +C+L++ V NK
Sbjct: 8   GFLFLASLCLLVQAVPNK 25


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 32  QSEEEASVNLNAINSVDLKRPW 97
           QS     V L A NSV +K PW
Sbjct: 152 QSSALDGVTLLADNSVSIKDPW 173


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 288 ATKSPASAPKPVTDPATYFPWDACPFALARL 196
           AT S +++P+P +  A       CP  +  L
Sbjct: 834 ATSSTSTSPRPASSTAATLVLSGCPSNMMEL 864



 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 291 LATKSPASAPKPVTDP 244
           L+ KSP+ +P+P+  P
Sbjct: 877 LSKKSPSPSPRPLVGP 892


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +1

Query: 112 LRPRSPGFRAPCLG 153
           ++P  PG++  C+G
Sbjct: 30  MKPTLPGYKIECVG 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,966
Number of Sequences: 438
Number of extensions: 2049
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)