Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M14
(359 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 29 0.98
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 0.98
AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 29 1.3
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 28 2.3
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 27 3.0
AF106583-12|AAD03133.1| 432|Caenorhabditis elegans Hypothetical... 27 3.9
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 27 5.2
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 27 5.2
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 27 5.2
U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical p... 27 5.2
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 27 5.2
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 27 5.2
AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical... 27 5.2
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 26 6.9
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 26 6.9
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 26 9.1
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 26 9.1
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 29.1 bits (62), Expect = 0.98
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDT---ADSTLGEDEQVEY 249
+ E+EDE E S++++DE +D+ D EDE+ EY
Sbjct: 885 EEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEY 924
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.1 bits (62), Expect = 0.98
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDT---ADSTLGEDEQVEY 249
+ E+EDE E S++++DE +D+ D EDE+ EY
Sbjct: 885 EEEYEDEDEEESEEDEDEEEDEDSEEDEDEEEYEDEESEY 924
>AL034488-12|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
+ E EDE E D+++DE DD D +DE+ E
Sbjct: 32 EEEDEDEEEENEDEDEDE---DDDNDDDEDDDEEEE 64
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQ 258
+ E EDE E ++++DE DD D ++E+
Sbjct: 30 EEEEEDEDEEEENEDEDEDEDDDNDDDEDDDEEE 63
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
+ E E+E D+++D+ DD D EDE E
Sbjct: 34 EDEDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEE 69
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/37 (29%), Positives = 23/37 (62%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVEY 249
D + E+E + D+E+D+ + D T + G+DE++ +
Sbjct: 425 DLKAEEESKKDKDKEKDKQIGDLTEEEKKGKDEEITH 461
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQV 255
D + E+E + D+E+D+ + D T + G+DE++
Sbjct: 425 DLKAEEESKKDKDKEKDKQIGDLTEEEKKGKDEEI 459
>AF106583-12|AAD03133.1| 432|Caenorhabditis elegans Hypothetical
protein F23C8.11 protein.
Length = 432
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = -1
Query: 344 DEPEATSDQEQDEVLFDDTADSTLGEDEQV 255
+E +++ D+E+DE + D+ D + G+DE+V
Sbjct: 39 NEDKSSDDEEEDEEVIDE-EDESDGDDEEV 67
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQ 258
D E E E D+++DE++ DD + EDE+
Sbjct: 37 DEEEEMEENEGDDEDEDEMVMDDEEEDD-DEDEE 69
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQ 258
D + EDE E ++E+DE D+ + E+E+
Sbjct: 577 DDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEE 610
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
D E E+E E S++E+++ +++ + + EDE+ E
Sbjct: 595 DEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEE 630
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQ 258
D + EDE E ++E+DE D+ + E+E+
Sbjct: 587 DDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEE 620
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
D E E+E E S++E+++ +++ + + EDE+ E
Sbjct: 605 DEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEE 640
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical
protein F22E10.3 protein.
Length = 1327
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 341 EPEATSDQEQDEVLFDDTADST 276
+PEAT + E++E+ DDT+ S+
Sbjct: 671 DPEATEEFEEEEIDLDDTSRSS 692
>U58758-10|AAB93435.1| 349|Caenorhabditis elegans Hypothetical
protein ZK1127.4 protein.
Length = 349
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 347 EDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
E+EPE D E+DE + D+ D + ++E+ E
Sbjct: 32 EEEPEPVEDVEEDEDVSDED-DEDIDDEEEDE 62
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 341 EPEATSDQEQDEVLFDDTADST 276
+PEAT + E++E+ DDT+ S+
Sbjct: 671 DPEATEEFEEEEIDLDDTSRSS 692
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTL 273
DS+ EDE E + E+DE +DT + L
Sbjct: 427 DSDDEDEDEEEEEDEEDEEEEEDTTNVPL 455
>AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical
protein Y37E3.10 protein.
Length = 342
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 347 EDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
EDE E+ D++++E DD + G D+QV+
Sbjct: 288 EDEEESEEDEDEEEDEDDDGLMAPKGLDQQVD 319
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVEY 249
DS+ DE E D+E+ E D+ D DE++EY
Sbjct: 811 DSDETDESEYYDDEEEIEDESDEYEDEEYW-DEEIEY 846
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 353 EHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
E +DE E T + E+D+ DD S +++ VE
Sbjct: 1872 EEDDEEEETMEDEEDDDDDDDDESSNENQEKLVE 1905
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
D E EDE E D + D+V+ D D E
Sbjct: 1789 DEEFEDEEEIPEDDDDDDVVVLSDGDDEPANDNDEE 1824
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 25.8 bits (54), Expect = 9.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -1
Query: 359 DSEHEDEPEATSDQEQDEVLFDDTADSTLGEDEQVE 252
D E EDE E D + D+V+ D D E
Sbjct: 1794 DEEFEDEEEIPEDDDDDDVVVLSDGDDEPANDNDEE 1829
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,259,668
Number of Sequences: 27780
Number of extensions: 52111
Number of successful extensions: 363
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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