Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M13
(450 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 262 2e-70
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 262 2e-70
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 262 2e-70
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 256 1e-68
AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p pro... 29 2.9
AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-P... 29 2.9
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 5.0
AE014296-2209|AAN11867.1| 797|Drosophila melanogaster CG32107-P... 27 8.8
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 262 bits (641), Expect = 2e-70
Identities = 119/147 (80%), Positives = 131/147 (89%)
Frame = +1
Query: 10 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 189
RGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV
Sbjct: 3 RGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVT 62
Query: 190 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 369
KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYK
Sbjct: 63 KIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYK 122
Query: 370 LCKVRRVATGPKSVP*LVTHDGRTLRY 450
LCKV++ G K VP LVTHDGRT+RY
Sbjct: 123 LCKVKKTQLGAKGVPFLVTHDGRTIRY 149
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 262 bits (641), Expect = 2e-70
Identities = 119/147 (80%), Positives = 131/147 (89%)
Frame = +1
Query: 10 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 189
RGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV
Sbjct: 3 RGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVT 62
Query: 190 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 369
KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYK
Sbjct: 63 KIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYK 122
Query: 370 LCKVRRVATGPKSVP*LVTHDGRTLRY 450
LCKV++ G K VP LVTHDGRT+RY
Sbjct: 123 LCKVKKTQLGAKGVPFLVTHDGRTIRY 149
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 262 bits (641), Expect = 2e-70
Identities = 119/147 (80%), Positives = 131/147 (89%)
Frame = +1
Query: 10 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 189
RGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV
Sbjct: 3 RGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVT 62
Query: 190 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 369
KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYK
Sbjct: 63 KIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYK 122
Query: 370 LCKVRRVATGPKSVP*LVTHDGRTLRY 450
LCKV++ G K VP LVTHDGRT+RY
Sbjct: 123 LCKVKKTQLGAKGVPFLVTHDGRTIRY 149
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 256 bits (627), Expect = 1e-68
Identities = 117/147 (79%), Positives = 129/147 (87%)
Frame = +1
Query: 10 RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVL 189
RGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV
Sbjct: 3 RGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVT 62
Query: 190 KIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYK 369
KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYK
Sbjct: 63 KIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYK 122
Query: 370 LCKVRRVATGPKSVP*LVTHDGRTLRY 450
LCKV++ G K VP LVTHDGRT+RY
Sbjct: 123 LCKVKKTQLGAKGVPFLVTHDGRTIRY 149
>AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p
protein.
Length = 707
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 378 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 199
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 328 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 387
Query: 198 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 73
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 388 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 429
>AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-PB,
isoform B protein.
Length = 714
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 378 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 199
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 335 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 394
Query: 198 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 73
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 395 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 436
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 49 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 219
++W L + AP P G + E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 220 -DGKVRTDPTYP 252
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
>AE014296-2209|AAN11867.1| 797|Drosophila melanogaster CG32107-PA
protein.
Length = 797
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -2
Query: 428 CVTSYGTLLGPVATRRTLHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFSMDTTSINP 255
C+ SYG++L P+A R L L + + +V L F + + + ++T ++P
Sbjct: 341 CILSYGSILAPLANLRNLKRLEIKGKLMSGSLVEL-FRALAALDKHTLQQLETAFLDP 397
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,940,991
Number of Sequences: 53049
Number of extensions: 462460
Number of successful extensions: 1194
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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