Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_M12
(364 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 67 3e-12
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 67 3e-12
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 39 0.001
AL034489-6|CAA22468.1| 157|Caenorhabditis elegans Hypothetical ... 31 0.33
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 27 4.0
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 27 4.0
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 27 4.0
Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical pr... 27 5.3
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 26 7.0
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 26 7.0
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 26 7.0
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 26 7.0
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 67.3 bits (157), Expect = 3e-12
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +3
Query: 30 ESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNKQNVER 209
E +A+ + + L + A +QW +A+ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 210 AKNXXXXXXXXXXXXXXSRTFLVTERITLADIIVYSTLLHAFQHVLDPTVR 362
KN +T+LV ER++LAD+ V LL AFQ+VLD R
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANAR 134
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 67.3 bits (157), Expect = 3e-12
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +3
Query: 30 ESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNKQNVER 209
E +A+ + + L + A +QW +A+ LLPA +V P + F+K+ VE+
Sbjct: 49 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 108
Query: 210 AKNXXXXXXXXXXXXXXSRTFLVTERITLADIIVYSTLLHAFQHVLDPTVR 362
KN +T+LV ER++LAD+ V LL AFQ+VLD R
Sbjct: 109 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANAR 159
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 30 ESNAIAYYVANDDLRGGDLATQARVLQWASWADSELLPASCAWVFPYLGIMQFNKQNVER 209
E +A+ + + L + A +QW +A+ LLPA +V P + F+K+ VE+
Sbjct: 49 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 108
Query: 210 AKN 218
KN
Sbjct: 109 YKN 111
>AL034489-6|CAA22468.1| 157|Caenorhabditis elegans Hypothetical
protein Y7A5A.8 protein.
Length = 157
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 359 YSRIQHMLESMQQRAVDDNICKSNPLRDQESAAQKMSIQKL 237
+S QH+L+ +RA+ ++ ++QE+ AQK+ I+KL
Sbjct: 67 FSNQQHLLQDKPKRAMAQGEHGNDASKEQEAKAQKVEIKKL 107
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 262 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 164
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 262 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 164
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 262 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 164
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 262 LKRCPSRSCSAASKSFFARSTFCLLNCMMPKYG 164
L RC S SCS S S +LN ++P +G
Sbjct: 189 LGRCESSSCSGNSGISDLVSALTMLNVILPSFG 221
>Z50177-1|CAA90543.2| 607|Caenorhabditis elegans Hypothetical
protein F46G10.2 protein.
Length = 607
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -1
Query: 163 KTHAQDAGSSSLSAHEAH 110
KTH+ D+G SSLS++ +H
Sbjct: 556 KTHSTDSGVSSLSSNSSH 573
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 335 ESMQQRAVDDNICKSNPLRDQESAAQKMSIQKLQCSQ*IILCTLYIL 195
E M + VDD CK PL + + ++ + + L+ +ILC +L
Sbjct: 476 EEMIEPFVDDGCCKVLPLPMRNALSEMIDLNLLKNKTMMILCISNLL 522
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 335 ESMQQRAVDDNICKSNPLRDQESAAQKMSIQKLQCSQ*IILCTLYIL 195
E M + VDD CK PL + + ++ + + L+ +ILC +L
Sbjct: 421 EEMIEPFVDDGCCKVLPLPMRNALSEMIDLNLLKNKTMMILCISNLL 467
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 335 ESMQQRAVDDNICKSNPLRDQESAAQKMSIQKLQCSQ*IILCTLYIL 195
E M + VDD CK PL + + ++ + + L+ +ILC +L
Sbjct: 476 EEMIEPFVDDGCCKVLPLPMRNALSEMIDLNLLKNKTMMILCISNLL 522
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 91 HRHVCCNGPHGLTVNCCRHPAHGS 162
H H+ C G L V+ C H +G+
Sbjct: 541 HSHLACQGTANLVVDACTHIWNGT 564
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,273,732
Number of Sequences: 27780
Number of extensions: 192881
Number of successful extensions: 559
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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